Olea europaea var. sylvestris (wild olive): 111393448
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Entry
111393448 CDS
T05244
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111393448
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
111393448
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-RING_5
Prok-RING_4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
111393448
NCBI-ProteinID:
XP_022874749
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Position
4:complement(7184804..7216345)
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AA seq
663 aa
AA seq
DB search
MKRLRWQEWESDIKKWIAEHSENDIDLNNHNDSISETIEPSSDLIVPLLRFQKEWLAWSL
RQEESVHRGGILADEMGMGKTVQAISLVLKKRAIRRHELQTSSTTLPSSSTTLPKVCPMI
STTLVICPLAVCKQWVSEIDSCTSEGSTRALLYEGTDRKKKVYQFSDYDFVITAYTTLEV
DYRYLILPKTSGENEKGHDCSILHSVQWDRIILDEAHYIKNDRSNTARAVFDLQSSYKWA
LSGTPFQNSVKDLHSLVRFLQMHPYCYYLCRSCDCSSLDYSAPTKCPHCPHVFRHFSWWN
KYISTPVEKHGNTGTGRDSMILLKHRILKRIMLRRTKEGRSAELRIHPKTVIERWLILDE
TEELYYKMAYKECLTLLNRDVEAGTPMNDILFNYVFDLVLHLRKVADHPYFQIFATEEKG
TEQCGLCDDPVEGLRVISCVHIFCKSCLSSLPSSSCPLCSKPLTVDFTGKKKSEAKSSIL
DRIKIENFQSSTKIEALREEISDMFERDGSAKGIVFSEFSSFLDLIHFALKRSGVLCVQV
DGYTPKHERPAAIKKFKEDPSCRILLTTFKVGGVGLNVTVASNVFLMEPSWNPLVEQQAQ
DRIHRIGQYKPTRIVRFLFKATIEERLLELQEMKRKLFEGTVGDCSENPRKSRESDLRFI
LQL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggctacggtggcaagaatgggaatctgatataaagaagtggatagcagaacat
tcggaaaatgatattgatttgaataatcataatgacagcattagtgaaactatagagcct
tcatcagatttgatagttcccctgctgaggttccagaaagagtggttagcctggtctcta
aggcaagaagaaagtgttcatcgagggggcattcttgcagatgaaatggggatgggcaaa
actgtccaggcaatatcccttgttcttaagaaacgagcgattcgtcggcatgaattacag
acatcttcgaccacattaccctcatcttcaaccacattgcccaaggtttgtccaatgatt
agcaccactcttgttatatgtcccttggcggtttgtaaacagtgggtaagtgagattgac
agttgcacttcggaaggaagcacgagggcgcttctttatgagggaaccgacagaaaaaag
aaagtttatcaattttccgactatgattttgttattaccgcatatacgactcttgaggtt
gattacaggtatttgatcctaccgaaaacatctggcgagaatgaaaagggacatgattgt
tctatattgcattctgtacaatgggatcgtatcattttagatgaggctcattatataaag
aatgatcgtagtaacacggccagagctgtttttgatttacaatcttcatataaatgggct
ttgagtggcacacccttccagaattctgttaaagatcttcactcacttgtccgctttctg
cagatgcatccttactgttattacttatgcaggagttgtgattgcagttcactagattat
agtgctccaacaaaatgtccacactgccctcatgtatttcggcactttagctggtggaac
aaatatatttctacaccagtagaaaaacatggaaatactgggactggtagggattctatg
attctgttgaaacacagaattttgaaacgcataatgttgagacgtaccaaagaagggagg
tcagctgaattgcgaattcatcctaaaactgttattgaaagatggctaatattggatgaa
actgaagaactttattataaaatggcatacaaggagtgcctaacactattaaatagagat
gttgaggctggaacaccgatgaatgatatcctattcaattacgtatttgatcttgtattg
cacctacggaaggtagccgaccacccttactttcagatttttgcaactgaagaaaagggt
actgaacaatgtggcttgtgtgacgaccccgtagaaggtcttcgcgtgatatcatgtgta
cacatcttctgcaaatcttgtttgtcttcactgccttccagttcctgccctttgtgttca
aaaccacttactgttgatttcactggcaagaagaaaagcgaagcaaagtcaagtattttg
gatagaattaaaattgaaaattttcagtcaagcaccaaaatagaagctttgagggaggaa
atcagtgacatgtttgaaagggatggttctgcaaagggaattgtcttcagcgaattctca
tcatttttggatcttattcatttcgctcttaagaggtcaggagtgctctgtgtgcaagta
gatgggtatacgcccaaacatgagagacctgctgctatcaaaaaatttaaagaggatcct
tcttgcagaatactccttacgacctttaaagtcggaggtgttgggctcaatgttaccgtg
gcatcaaatgttttcttgatggagcctagctggaatcctctggtcgagcagcaagctcaa
gatagaatacatcgaataggacaatacaaaccaaccaggattgtgaggtttctttttaaa
gctacaattgaggaaaggcttttggagttacaagagatgaaaagaaaactgtttgaaggg
actgtgggtgactgttcagagaacccaaggaaatcaagagagtctgacttgagattcata
cttcaattataa
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