Olea europaea var. sylvestris (wild olive): 111402510
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Entry
111402510 CDS
T05244
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111402510
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
111402510
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
ResIII
zf-RING_UBOX
DEAD
zf-RING_2
zf-RING_5
zf-RING_6
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111402510
NCBI-ProteinID:
XP_022886644
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Position
10:complement(45123408..45131380)
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AA seq
823 aa
AA seq
DB search
MKPRSHGDEASSSKGNKNPEYIENSYEDDRNTVLSNSDSNTLSSDSNYGAFLDVDENISN
AIEENGQEEILDYDHVLEVAQGEGELNVNIIEGRKKRSKKREKPTLLWQVWEQENERWVA
ENSTGDIDLSNQNDTLRDVLEPPPDLIMPLLRYQKEWLAWSVKQEASAMRGGILADEMGM
GKTVQAISLVLKKREMNPAIPGTELPSYIIKGTLVVCPLAAAMQWVSEIERCTARGSTKV
LLYHGAKREENFCRFSEYDFVITTYNVLATDSRKYLIPKEKCLVCGKLFYEKKLKMHLRS
PCKQKNTSNSVLKTRKRGPKKDRKSREKELGLEYSIENSVLTGKSMLHSVKWERIILDEA
HDIKDKRRIKAKAVFDLQSSYKWALTGTPLQNHIEELYSFVRFLQIVPYSYYFCKDCDCR
SLDYSAGGECPHCLHKTRHFCWWDKYITSPLRRRGGRDAMNLLTHKILKSIMLRRTKKGR
AADLALPHRTVIIKRLTLDVVEEDYYKALYKKCRARFNTYVEAGTLMNNRTHIFSHLTRL
RQAVDHPYLVQFSDTASERKGKAVDTCNGEQCSLCQDLVEDPVVTSCAHMFCKSCLIDYS
AIMGQDSCPSCSTPLTVDSTGKDCREQNESTILGFKSSSILNRIQLKAFKTSTKIEALRE
EIRDMFERDGSAKGIVFSQFTSFLDLIHYSLQQSGVNCVQYDGSMTLGARDAAITRFNED
PDCRIFLINLRAGGVALNLTVASNVFLMDPWWNPAVEQQAQERIYRIGQYKPIRIVKFIV
ENTIEERILKLQEKKQLMFEGTIDGSSKAIGKYEPSDFIYLFE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcgctctcatggtgatgaagcttcgtcttccaaagggaataaaaatcctgaa
tacatagagaactcttatgaggatgataggaatacggttttgtcgaattccgatagtaat
acgctgtcgtcggattccaattatggcgcatttcttgatgtagatgaaaatatatcgaat
gcgattgaagagaacggacaggaagagattttagactatgatcatgtcttggaagttgcg
cagggagaaggagaactgaatgtgaatattattgaggggagaaagaagaggagtaagaaa
agggagaaacccacattattgtggcaagtatgggaacaagaaaatgagaggtgggttgca
gagaattcgaccggagacattgatttgagcaatcagaatgatacgttgcgtgatgttctt
gagcctccaccagatttgataatgccgctattgaggtaccagaaagaatggttggcttgg
tctgtaaagcaagaagcatctgctatgagaggaggtattcttgcagatgaaatggggatg
ggcaagactgtccaggcaatatccctcgttctaaaaaaacgagaaatgaacccagccatt
cctgggactgaattaccctcgtatataattaaaggcactctcgttgtatgtcccttggcg
gctgcaatgcagtgggtaagtgagattgaacgttgcactgcgagaggaagcacgaaggtg
cttctttatcatggagcgaaaagagaagagaacttttgtcgattttctgagtatgacttt
gttattactacgtataacgttcttgcgactgattccaggaagtatctgataccaaaagag
aaatgcctcgtatgtggaaaattattctacgaaaagaagttgaaaatgcacttgagatct
ccatgtaagcagaagaatacctctaactctgtactcaaaactaggaagagaggtcccaag
aaagataggaagagccgggagaaggaactgggacttgaatattcaattgaaaattctgtg
cttacaggcaaatctatgctacattctgtgaaatgggaacgtatcattttggatgaggct
catgatataaaagataaacgcagaatcaaagccaaagctgtttttgatttacaatcttca
tataaatgggctttgactggcacacccctccagaatcatattgaagagctctactcattt
gttcggtttctgcagatagttccttactcttattacttctgtaaagattgtgattgccgc
tcactagattacagtgccggaggagaatgtccacactgccttcacaaaactcggcacttt
tgctggtgggacaaatatattacttcaccgttaaggaggaggggcggcagggatgctatg
aatttgttgacacacaaaattttgaaaagcataatgttgagacgtaccaagaagggcagg
gctgctgatcttgcactgcctcatagaactgttatcataaaacggcttacactggatgtt
gtagaagaagattattataaagcattgtacaagaagtgtcgggcacggttcaatacatat
gtagaagcaggaacactgatgaataaccgtactcacatattttcacatctaacgcgccta
cgacaggcagttgatcatccttacttagtgcaattttctgatactgcatcggaaagaaag
ggtaaagcagttgatacttgcaacggtgaacagtgtagcttgtgtcaagatcttgtagaa
gatcctgttgtgacatcatgtgcacacatgttctgcaaatcttgtttgatagattattct
gctatcatgggacaggactcctgcccttcgtgttcaacaccactcactgttgattctact
ggcaaggattgcagggagcagaatgaaagcaccattttagggttcaagtcctctagtatt
ttgaatagaattcaactcaaggctttcaagacgagcactaaaatagaagctttgagggag
gaaatcagagacatgtttgaaagggatggttcagcaaagggaattgtcttcagccaattt
acatcctttctggatctcatacattactctcttcagcagtcgggagtgaactgtgtgcaa
tatgatgggagtatgaccctaggagctagagatgctgctatcacaagatttaatgaggat
cctgattgcagaatattccttataaacttgagagccggtggtgttgccctcaatcttaca
gtggcatcaaatgttttcttgatggatccatggtggaatcctgctgtggagcagcaagct
caggaaagaatctatcgtataggacaatacaaaccaatcaggattgtgaagtttatcgtt
gaaaacacaatcgaggagaggattttgaagttgcaagagaagaagcaattaatgtttgaa
gggactatagatggttcttcaaaggctatcgggaagtatgaaccgtctgatttcatatac
ctgttcgaatag
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