Olea europaea var. sylvestris (wild olive): 111408748
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Entry
111408748 CDS
T05244
Name
(RefSeq) sm-like protein LSM3A
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111408748
09123 Folding, sorting and degradation
03018 RNA degradation
111408748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111408748
03041 Spliceosome [BR:
oeu03041
]
111408748
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111408748
mRNA degradation factors
5'-3' decay
Lsm complex
111408748
Spliceosome [BR:
oeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111408748
Complex C
U2 snRNP components
111408748
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
U6-snRNA_bdg
Motif
Other DBs
NCBI-GeneID:
111408748
NCBI-ProteinID:
XP_022894278
LinkDB
All DBs
Position
14:complement(1943566..1946555)
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AA seq
97 aa
AA seq
DB search
MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTSVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgaagaggagagcgcagtgaaggagccattggacctcatccgcctcagtctc
gatgagcgcatttacgtcaagctccgtcatgaccgcgagcttcgcggcaagctccatgcc
tatgatcagcatttgaatatgattcttggtgatgttgaagagatagttacatctgtggaa
attgatgatgagacatacgaggagattgtccggaccacgaggcgtacagtgccgtttctg
tttgtcagaggagacggtgtcatcttggtttcacctccattaaggacagcctga
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