Oxalobacter formigenes: BRW83_2020
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Entry
BRW83_2020 CDS
T04835
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRW83_2020 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_2020 (nth)
Enzymes [BR:
ofo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BRW83_2020 (nth)
DNA repair and recombination proteins [BR:
ofo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRW83_2020 (nth)
Prokaryotic type
BRW83_2020 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
ORC6_2nd
HHH_5
HHH_8
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ARQ46758
LinkDB
All DBs
Position
2149957..2150598
Genome browser
AA seq
213 aa
AA seq
DB search
MTPKKIEEMFERFKKANPDPRSDLQFNSPYELLVAVMLSAQATDISVNKATEKLYPVANT
PESIIALGVEGLKSYVKTINLYPTKSKNIIRMSEILLEKHDGDVPADREALEALPGVGRK
TANVVLNTAFNQMTMAVDTHIFRVSNRTGLAPGKNVLEVEKGLVKVIPPKYMMNAHHWLL
LHGRYVCKAKNFQCENCLINDLCGYPDKTTAAR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaaaaaaatagaagaaatgttcgagcgcttcaaaaaagcgaatcccgatccc
cgatctgatctgcaattcaacagtccttatgaattgctcgttgccgtgatgttatccgct
caggcgacggacatctcggtcaacaaggcgactgaaaaactgtatccggtcgccaacact
cccgaatccattattgcgcttggtgttgaaggactgaagtcttacgtcaagacgatcaac
ctgtatcctaccaagtccaaaaacatcattcgcatgtcggaaatattgctggaaaaacac
gacggcgacgttcccgcagaccgggaagcgcttgaagcacttccgggcgtcgggcgcaag
acggccaacgtcgttctgaacacggctttcaatcagatgacgatggcagtcgatacgcat
atcttccgcgtgtcgaaccggaccgggcttgccccgggcaaaaacgtgctggaagttgaa
aagggactggtgaaagtcatccctccgaaatacatgatgaacgcccaccactggcttttg
ctgcatgggcgttatgtctgcaaggccaagaatttccagtgtgaaaactgtctgatcaac
gacctttgcggataccccgataaaacaacggcagcaaggtaa
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