Ostrinia furnacalis (Asian corn borer): 114351999
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Entry
114351999 CDS
T07986
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114351999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ofu03041
]
114351999
Spliceosome [BR:
ofu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114351999
Complex C
U5 SnRNP specific factors
114351999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
FANCL_d3
Roc
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
114351999
NCBI-ProteinID:
XP_028159210
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSDDDQSVYGQDNRDADEDAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKHKKFQVQEQQLPETNYDMEYLA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLMRQTHPGTINNDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKNIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTLCINKIDRLILELKLPPADAYYKLRHIIDELNSMLETHQPQDNPT
EPATVFSPLLGNVCFASSLYDVCFSLGSFAAMYAAAHPGAGLRSAELAGWLWGDIYFNAK
TRRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLSELGIKLTKQEAKLNV
RPLLRLVCSRFFGDFSGFVDMVVTHVPSPLDAAERKVGHTYRGTEGALREDMLRCDQSGR
LVAHTAKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSSHDEEDSRIMNVGRLWIY
EARYKVELNRVPAGCWALIEGVDQPIVKTCTIVSAEEDEELHTFRPLRFNTQAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKTIVIRPLEPQPATHLAREFMVKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatctctatgacgagttcggcaattacatcggccctgacctagagtcggat
tccgacgatgaccagagtgtttacggccaggataacagagacgccgatgaggatgccatg
gaggaggacgaggacgctgatgcggagcccgaggtggctcctatgtccgttgtccttcac
gaggataaacggtattaccctcaagcagtagaagtgtacgggcctgacgttgaaacggta
gtacaagaggaggatacacaagcactagacaagccgctggtggaacctgtgaagcacaag
aagtttcaagtgcaggaacaacagttaccggagaccaactatgacatggagtacttggcg
gatatgctggataatactaatttgatgaggaatatcactttgatgggacatttacataat
ggtaaaacatcatttgtggactgtctaatgagacaaacccaccccggcaccataaacaat
gacaccacaatcccgatgcggtacaccgacacattatttgtggagcaagagcgaggagtg
tctatcaagtctatgccagtcactctgctcctcaagaacataaagggaaagtcacatttg
ttaaacatcatggacacacctggacatgtcaactttagtgatgaagtcacagctgctttg
aggatttcggatggtgcggttttattcgtcgacgcagcagaaggtataatgctgaacaca
gagcgtctactacgtcacgcggtgcaagagcgcgttcctctcacgttatgcattaataaa
atcgaccgcctgatcttagaactgaagctgccgcccgcagacgcgtattacaagctgcgg
catattattgacgagctcaattcgatgctcgagacgcatcagccgcaggataacccgacg
gaaccggctacagtgttctcgccacttctgggcaacgtgtgcttcgcctcatctctatac
gacgtgtgcttctctcttgggtcatttgctgcgatgtatgcggcagcgcacccgggcgcc
gggcttcggtccgcggaactggccggctggctgtggggagacatctacttcaacgccaag
accagacgcttcacgaagaagcaaccacatgcgtctgcgcagagaagctttgtggagttt
attttggagccgctttacaagatctttgctcaggtggtaggcgacgtagacgatacattg
ccggcggtactaagcgagctcggcatcaagctgacgaagcaggaggccaagctgaacgtg
cggccgctgctccggctggtctgcagccgattcttcggggacttctctggcttcgtggac
atggtggtgacccacgtgccttcgcctctcgacgcggcggagcgcaaagtgggccacaca
tacaggggcaccgagggggcacttcgcgaagacatgctgcgctgcgaccagtccggccgg
ctcgtggcgcatactgccaagatgtacccgactgatgactgcaccttcttcctggttctg
gcgcggataatgtctggcacattatacgcggggcagacggtgcgagtgttgggagagaac
tacagttcgcacgacgaggaggactcgagaattatgaacgtcggccgcctgtggatatac
gaggcccggtataaggtggaactgaaccgagtaccggccggctgctgggcgctgatagaa
ggcgtggaccagcccatcgtgaagacctgcaccattgtctccgctgaggaagacgaggag
cttcacacttttaggccgctgcgattcaacacgcaagcggttgtcaagatcgctgtggag
ccggtcaacccgtccgagctgccaaagatgttggatggacttagaaaggtgaacaaatcg
tatccccttctttcgacgcgcgtggaggagagcggcgagcacgtgatcctgggcacgggc
gaattgtacctggactgcgtcatgcacgacctgcgcaatatgtattcggagatcgacatc
aaagtcgcggacccggtagtatcattctgcgagacagtagtcgagacctcctcgctaaag
tgcttcgcggagacgcccaacaagcggaacaagctgaccatgatagcggagccgctcgag
cgcggactcgccgaagacatcgaggccggcgccgtttgcgtcacgtgggaccgcaagcgc
ctcggcgagttcttccagaccaaatatgactgggacttgctagcggcgcgttcgatctgg
gcgttcgggcccgacaccactgggcccaacatcttagtagacgacacgttgccgtccgaa
gtcgacaagcatctgctggcctccgtcaaggacagcatcgtgcaaggtttccaatggggc
acgcgtgagggcccgctatgtgaggagcccatccgaaacgtgaagttcaagatcctggac
gcggtcatagcacaggagccgctgcacagaggcggtgggcaaatcattcccactgctcgg
agggtggcatattctgcgttcctgatggcgacgccgcgtctgatggagccctatttattt
gtggaggtgcaggcgcccgccgactgtgtctcagcagtctacaccgtgctcgcaaagcga
agaggtcacgtgacgcaagacgcgcccgtgccgggttcaccattatacacgatcaaagcg
ttcgtgccggccatcgactcgttcggcttcgagacggacctgcggacgcacacgcagggc
caggccttctgtctgcaggtgttccaccattggcagatcgtgcctggtgacccgctggat
aagaccattgttatacgcccgctcgagccgcagcccgccacgcacctggcgcgcgagttc
atggtcaagacgcggcgccgcaaggggctcagcgaggacgtgtccatcaacaagttcttc
gacgaccccatgctgctggagctcgcccgccaagatgtacagctcaattga
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