KEGG   Otolemur garnettii (small-eared galago): 100948501
Entry
100948501         CDS       T07855                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100948501 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oga03041]
    100948501 (SMNDC1)
Spliceosome [BR:oga03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100948501 (SMNDC1)
 Complex B
    100948501 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100948501 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100948501
NCBI-ProteinID: XP_003787225
Ensembl: ENSOGAG00000000571
UniProt: H0WGQ2
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagatttagcaaagcagctggcaagctataaagctcaactccagcaagttgaa
gctgcattatctggaaatggagaaaatgaagatttgctaaaattgaagaaagatttacaa
gaagtcatagaactaaccaaagaccttctgtcaactcaaccttctgaaactcttgcaagt
tcagacaattttgcatctactcagcccacacattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aatggcaccgctgcaatcacctttgctggttatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgagcaggaaagagaagatcagaaggtgaaatggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtaacaggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacaatatcaagatacttctaaatacaatgttaggcatttgatgcctcaataa

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