KEGG   Otolemur garnettii (small-eared galago): 100950473
Entry
100950473         CDS       T07855                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03250  Viral life cycle - HIV-1
oga05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100950473
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100950473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oga03019]
    100950473
Messenger RNA biogenesis [BR:oga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100950473
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC_C APOBEC3 APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1
Other DBs
NCBI-GeneID: 100950473
NCBI-ProteinID: XP_023365222
LinkDB
Position
Unknown
AA seq 539 aa
MNPRIRDPMNRMYPKTFCQNFEKEPCPSNQNSSWLCFEVETKNSAVFFHRGVFRNQGPVK
TPCHAEECFLTWIQGVLPPDHHYHVTWYVSRGPCANCANLIVHFLAMHRRVTLTIFAAHL
NFFWESDFQQGLLRMDQEGVQLHIMGYEEFEYCWDNFVYNQRKQFVPWNGLNENYEFMVS
TLEDILRSPLDRIRQKDFSIHFRNSLWLDDKSTWLCFEVKRTKSPVPLYRGVFRNQSPPK
TPCHAEVRFFTWLQDLPPDFCCQFTWYLSWSPCADCADLVANFLAKHRNVSLTIFVARLY
YYRDPEMHRGLRRMYQEGANVDIMSVIEFEYCWDNFVYNQGKQFVPWNGLNENYEFLVPR
LQEILEQMDPLVQQHALATTKRPSAGQQASGIPTSRVEAGVLHLVPHLVSLCLSEAMPEH
VNSRKVLRTSDSRKHLLKQSASRAQGEPSRGAIRADSSKSGAETHHVYTSFIFSCSSSNP
CTDTSSYSSGSCSAIAVSESCANTTAVSAISILTIPLSSTSSLSCRTQGTGYRACRSHQ
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgaacccacggatcagagacccgatgaaccgaatgtatccaaagacattctgccaaaac
tttgaaaaagaaccctgcccctctaatcagaacagctcctggctgtgctttgaggtggaa
acgaaaaactcagctgtcttcttccacagaggggtgtttcgaaaccagggccctgtcaag
actccttgccatgcagaagaatgtttcctgacttggatccaaggggtactgccccctgac
caccactaccatgtcacctggtatgtatccaggggtccctgcgccaactgtgcaaatctt
attgttcactttctggccatgcacagaagggtgaccctgaccatctttgctgcccacctc
aacttcttctgggaatcagatttccagcaagggcttctcaggatggatcaggaaggggtc
cagctgcacatcatgggttatgaagaatttgaatactgttgggacaactttgtgtacaac
cagagaaagcaatttgtgccttggaatggattgaatgaaaattatgagttcatggtttcc
acgctggaggacattctcagaagccctttggataggatacgtcaaaaagacttcagcatc
cactttcggaactctctgtggcttgatgacaaaagtacctggctgtgctttgaggtgaaa
agaaccaagtcacctgtccccctctacagaggagtctttcgaaaccagagccctcccaag
actccttgccatgcagaagtacgcttcttcacttggcttcaggatctgccccctgacttc
tgctgccaattcacttggtacttatcctggagtccctgtgctgactgtgcagatcttgtg
gctaattttctggccaaacacagaaatgtgagcctgaccattttcgttgcccgcctctac
tactatcgtgacccagaaatgcataggggacttcgcaggatgtatcaagaaggggccaat
gtggacatcatgtctgttatagaatttgaatactgttgggacaactttgtgtacaaccag
ggaaagcaattcgtgccttggaatggattgaatgaaaattatgaattcctggtccccagg
ctgcaggagattctcgagcagatggacccactggtccagcaacatgctttggcgaccacc
aagagaccatcagctgggcagcaggcatcagggatacccacaagccgtgtggaggctgga
gtcctgcatttggtaccccacctggtttccctttgccttagtgaagcaatgccagagcat
gtgaattctcgcaaggttttgaggacaagtgactcccgaaaacatcttctaaagcagagc
gcatcacgggctcagggggagccatcaaggggagccatcagggcagactcgagtaaatct
ggagcagagacgcaccacgtctacaccagtttcattttcagttgctcctcctccaatccc
tgtacagacacctccagttacagttcaggcagctgttctgccatcgcagtctcagaatcc
tgtgccaacaccacagccgtctcagccattagtatcctcaccataccattgtcctccacc
agctcccttagttgcagaactcagggcacagggtacagggcttgcaggtcccaccagtaa

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