Otolemur garnettii (small-eared galago): 100952247
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Entry
100952247 CDS
T07855
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X14
KO
K16500
protocadherin-15
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100952247 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oga03037
]
100952247 (PCDH15)
04515 Cell adhesion molecules [BR:
oga04515
]
100952247 (PCDH15)
Cilium and associated proteins [BR:
oga03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100952247 (PCDH15)
Cell adhesion molecules [BR:
oga04515
]
Cadherins
Protocadherins
100952247 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_Cad99C_N
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_CELSR2_9th
CDH23_a-b
PRIMA1
Motif
Other DBs
NCBI-GeneID:
100952247
NCBI-ProteinID:
XP_003783698
Ensembl:
ENSOGAG00000002500
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MFQQSYLWKCLASGIIIGSIVRICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTVFTGFSGDNGATDID
DGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNFEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV
TPPIEAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELTLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTKSSYQGYILESAPVGATISDSLNL
TTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYVYTDMNPGDSVIQLTAVDADEGS
NGEITYDILVGAQGDFIINRTTGLITVAPGVELIVGRTYALTVQAADNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPIRYAIENGDPQGV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVRATDPDAGINGQVYYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLR
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRLYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVLYPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELAPRGTMVGVISAAAINQSIVYSIVSGNEEDKF
GINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDH
APVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDNYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQSALPAAKPAAPAPAPVAAPPPPPP
PPGAHLYEELGDSTMHKYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEWARKRMI
KLVVDREYETSSTGEDSATECQRSRLHNPNIHSNINGNIYIAQNGSVVRTRRACLTDNLK
VSSPVRLGRHFKKLDKLAVTHEEHVPLNTLSKGPFSTEKVNTRPTLVTFAPCPVGKEGIA
AKPVGNRLKSTVEQEPMTDPKNVKEALEFHSDHTQSDEEELWMGPWSNLHIPMTKL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacagtcatatctctggaaatgtttagcttcagggatcatcatcggctctatt
gtcagaatctgcttgggccagtacgacgatgactgcaaactagctagaggaggaccacca
gctaccatagttgctattgatgaagagagtcggaatggtacaattctggtggacaacatg
ctgatcaaagggacagcgggaggcccagaccccaccatagaactctccttaaaggacaat
gtggactactgggtgctgctggatcctgtgaagcagatgcttttcctgaacagcacaggc
agagttctggatagagatccaccaatgaatatacactccatcgtggtgcaagtccagtgc
atcaacaaaaaggtgggcactgtcatctaccatgaagtgcgaatcgtggtgagagacagg
aatgacaactcgcccacattcaagcacgaaagttactacgccaccgtcaatgagctcact
ccagttggcaccacagtatttacaggattttcaggagacaatggagctacagacatagat
gatggccccaatggacagatagaatatgttattcagtacaatccagaggatccgacatcc
aatgacacctttgaaattcccttaatgttgaccgggaatgtggtgctaaggaagaggctc
aactttgaagataagactcgctactttgtcatcatccaagcgaatgaccgtgcacaaaac
ctgaacgagaggcgaaccaccaccaccaccctcacggtggatgttctggatggagatgac
ttgggtccaatgtttctgccttgtgtcctcgtgccaaacactcgtgactgtcgccccctc
acttaccaagctgccatacctgaactgagaactccggaagaactgaaccccattattgtt
accccaccaatcgaagccattgatcaagacaggaatattcaaccaccgtcagacaggccg
ggcatactctactccatccttgttgggactcctgaggattacccacgatttttccatatg
caccctaggactgcggaacttactctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaggacaatggccatcctctccctgcctttgccagt
ctgcacattgaaatactggatgaaaacaaccagagtccgtacttcacaaagtccagttac
caaggctatatcctggaatctgcccctgtgggagcaaccatttctgacagtctaaatctg
accactcctctaagaatagtagctctggacaaggacatagaagatacaaaagacccagag
cttcacctcttcctgaatgattacacttcagtcttcactgttacgcagactggtatcact
cgctacctcaccttactgcaacccgtggacagggaagaacagcaaacttatacgttttcg
ataacagcatttgatggtgttcaagaaagcgagcccgttatcgtcaacattcgcgtgatg
gacgcaaatgataacacgcccacgttccccgaaatatcttacaatgtctacgtttataca
gatatgaaccccggggacagcgtcatacagctcactgcagtcgacgcagatgaagggtca
aacggagagatcacgtatgacatcctggtcggggcccagggcgacttcatcatcaacaga
accacggggctgatcactgtcgcgccgggggtggaactgatagtcgggcggacttacgcg
ctcacagtccaagccgcggataatgctccccctgcagagagaaggcactccatctgcact
gtgtacattgaagtgcttcctcccaataatcaaagccctcctcgcttcccacagctgatg
tatagtcttgaaatcagtgaagccatgaggattggtgctgtcttattaaatctgcaggca
actgaccgagagggggacccaataagatacgccattgagaatggagatcctcagggagtt
tttaatctttcagaaactacggggattctaaccttagggaaagcactggacagggaaagc
acggatcgctacattctgatcatcacagcgtcagatggcaggccggatgggacttccact
gccacagtgaatgtggtggtgacagatgtgaatgacaatgctccggtatttgatccctat
ctgcctagaaatttatctgtggtagaggaagaagccaatgcctttgtgggtcaagtgagg
gcaacggaccctgatgctggaataaatggccaagtgtactacagtttgggcaacttcaat
aatctttttcgcatcacgtctaacgggagcatttacacagcagtgaagcttaacagagaa
gtcagagactactatgaactcgtcgttgtggcaacagatggagcagtacaccctcgtcat
tcaactctcacactggccatcaaggttttggatattgatgataatagtcccgtgttcacc
aattcaacatacactgtcgtagttgaagagaatctgccggctgggaccaccttccttcga
atagaggccaaagatgttgaccttggagcaaatgtttcttaccggataagaagcccagaa
gtgaagcacttttttgcactacatccgttcacgggagaactgtcccttttaaggagttta
gattatgaggcatttccagaccaagaagccactattacttttctggtggaggcctttgat
atttatggaacgatgccacctggtattgctactgtcacagtgatagtaaaggatatgaat
gattatcctcctgttttcagtaaacgactctacaaggggatggtggctccagacgcggtc
aagggtacccccatcacaacagtttacgcagaagacgcagaccctcctggattacctgca
agtcgcgtaaggtacagagtagatgatgtcctgtatccttatcctgccagtatttttgat
gtagaagaagattcaggaagagtaatcactagagtcaatcttaatgaagaacctacaaca
atttttaagttggtggtggttgcttttgatgatggtgagcctgtgatgtctagcagtgcc
actgtgaagattcttgttttacatcctggagaaatcccacgcttcacacaagaggaatac
agacctccaccagtaagtgaacttgcccccagggggacgatggttggtgtaatttctgct
gccgccattaatcagagtatagtgtactccatcgtttcaggaaatgaagaagacaagttt
ggaattaataatatcacaggcgtcatctatgtgaatgcccctctggattatgagaccagg
acaagctacgtacttcgagtccaagctgattccctagaggtggtccttgccaatctccga
gttccttcaaagagcaatacagcgaaagtatacattgaaattcaggatgaaaacgatcat
gccccagtgtttcagaaaaaattctacattggaggagtgtctgaagatgcaagaatgttt
gcttctgtgctcagagttaaggctactgataaagatactggtaattacagtgccatggcg
tacagactcataatacccccaattaaagaaggaaaagaaggatttgtggtagagacgtat
acagggctcatcaaaaccgctatgctcttccacaacatgaggaggtcttacttcaagttt
caagttattgcaactgacaactatgggaagggcctgagcggcaaagcagacgtgcttgtc
tctgtggtgaatcagctggatatgcaagttattgtttccaatgtgcccccaactctagtg
gaaaaaaagatagaagatcttacagagattttggatcgctacgttcaggagcaaattcct
ggtgccaaggttgtggtggagtccatcggtgctcgccggcatggagatgccttttctcta
gaagattacaccaaatgtgacctgacagtctatgcaattgaccctcaaaccaacagagcc
atcgacagaaatgagctttttaaatttttagatggcaagctgcttgatatcaataaagac
tttcagccatattacggggaaggaggacgtattttggagatccggactccagaggcagtg
accagcattaagaagcgaggagaaagtctaggatacacagaaggggccttgctggctctg
gctttcatcatcatcctctgctgcattcccgccatcctggtcgttttggtcagctacaga
cagtttaaagtacgccaagctgagtgcaccaagactgcgcgaattcaatccgcgctcccc
gcggctaagccagcagccccagccccggcgcccgtggccgcgcccccgcccccgccgcca
cctcccggtgcacatctctatgaagaacttggagacagcacaatgcataagtatgaaatg
cctcaatatggaagtcgccgccgattgttaccaccggctggacaagaggaatatggtgag
gtggttggtgaagctgaggaggaatatgaggaggaagagtgggcgagaaaaagaatgatc
aaattagttgtcgatcgagagtatgaaaccagctcaacgggagaagacagcgctaccgaa
tgtcagaggagccgtcttcacaatcctaatatccacagtaatatcaacggcaatatatat
attgcccagaacggttctgtggtgagaactcgccgtgcctgcctcaccgataacttaaaa
gtttcttcaccggtccgactgggaaggcactttaagaaactagacaagttggcagtgaca
catgaggaacatgtgcccctgaacacgttgtcaaaggggccgttctctactgagaaagtg
aacacaagaccaactctggttacctttgccccttgccccgtggggaaggagggtatagca
gcgaagcccgtggggaacagactgaaaagcacagttgaacaggagcccatgactgacccc
aagaacgtcaaggaggccttggaatttcacagcgaccacacgcagtcggatgaggaagag
ctttggatgggcccctggagcaacctccatataccaatgacaaaactgtga
DBGET
integrated database retrieval system