KEGG   Otolemur garnettii (small-eared galago): 100952247
Entry
100952247         CDS       T07855                                 
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X14
  KO
K16500  protocadherin-15
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:oga00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    100952247 (PCDH15)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oga03037]
    100952247 (PCDH15)
   04515 Cell adhesion molecules [BR:oga04515]
    100952247 (PCDH15)
Cilium and associated proteins [BR:oga03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   100952247 (PCDH15)
Cell adhesion molecules [BR:oga04515]
 Cadherins
  Protocadherins
   100952247 (PCDH15)
SSDB
Motif
Pfam: Cadherin ECD PCDH15_12th Ig_Cad99C_N Ig_CLSTN Cadherin_FAT4_N Cadherin_CELSR2_9th CDH23_a-b PRIMA1
Other DBs
NCBI-GeneID: 100952247
NCBI-ProteinID: XP_003783698
Ensembl: ENSOGAG00000002500
LinkDB
Position
Unknown
AA seq 1676 aa
MFQQSYLWKCLASGIIIGSIVRICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTVFTGFSGDNGATDID
DGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNFEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV
TPPIEAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELTLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTKSSYQGYILESAPVGATISDSLNL
TTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYVYTDMNPGDSVIQLTAVDADEGS
NGEITYDILVGAQGDFIINRTTGLITVAPGVELIVGRTYALTVQAADNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPIRYAIENGDPQGV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVRATDPDAGINGQVYYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLR
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRLYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVLYPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELAPRGTMVGVISAAAINQSIVYSIVSGNEEDKF
GINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDH
APVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDNYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQSALPAAKPAAPAPAPVAAPPPPPP
PPGAHLYEELGDSTMHKYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEWARKRMI
KLVVDREYETSSTGEDSATECQRSRLHNPNIHSNINGNIYIAQNGSVVRTRRACLTDNLK
VSSPVRLGRHFKKLDKLAVTHEEHVPLNTLSKGPFSTEKVNTRPTLVTFAPCPVGKEGIA
AKPVGNRLKSTVEQEPMTDPKNVKEALEFHSDHTQSDEEELWMGPWSNLHIPMTKL
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgtttcaacagtcatatctctggaaatgtttagcttcagggatcatcatcggctctatt
gtcagaatctgcttgggccagtacgacgatgactgcaaactagctagaggaggaccacca
gctaccatagttgctattgatgaagagagtcggaatggtacaattctggtggacaacatg
ctgatcaaagggacagcgggaggcccagaccccaccatagaactctccttaaaggacaat
gtggactactgggtgctgctggatcctgtgaagcagatgcttttcctgaacagcacaggc
agagttctggatagagatccaccaatgaatatacactccatcgtggtgcaagtccagtgc
atcaacaaaaaggtgggcactgtcatctaccatgaagtgcgaatcgtggtgagagacagg
aatgacaactcgcccacattcaagcacgaaagttactacgccaccgtcaatgagctcact
ccagttggcaccacagtatttacaggattttcaggagacaatggagctacagacatagat
gatggccccaatggacagatagaatatgttattcagtacaatccagaggatccgacatcc
aatgacacctttgaaattcccttaatgttgaccgggaatgtggtgctaaggaagaggctc
aactttgaagataagactcgctactttgtcatcatccaagcgaatgaccgtgcacaaaac
ctgaacgagaggcgaaccaccaccaccaccctcacggtggatgttctggatggagatgac
ttgggtccaatgtttctgccttgtgtcctcgtgccaaacactcgtgactgtcgccccctc
acttaccaagctgccatacctgaactgagaactccggaagaactgaaccccattattgtt
accccaccaatcgaagccattgatcaagacaggaatattcaaccaccgtcagacaggccg
ggcatactctactccatccttgttgggactcctgaggattacccacgatttttccatatg
caccctaggactgcggaacttactctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaggacaatggccatcctctccctgcctttgccagt
ctgcacattgaaatactggatgaaaacaaccagagtccgtacttcacaaagtccagttac
caaggctatatcctggaatctgcccctgtgggagcaaccatttctgacagtctaaatctg
accactcctctaagaatagtagctctggacaaggacatagaagatacaaaagacccagag
cttcacctcttcctgaatgattacacttcagtcttcactgttacgcagactggtatcact
cgctacctcaccttactgcaacccgtggacagggaagaacagcaaacttatacgttttcg
ataacagcatttgatggtgttcaagaaagcgagcccgttatcgtcaacattcgcgtgatg
gacgcaaatgataacacgcccacgttccccgaaatatcttacaatgtctacgtttataca
gatatgaaccccggggacagcgtcatacagctcactgcagtcgacgcagatgaagggtca
aacggagagatcacgtatgacatcctggtcggggcccagggcgacttcatcatcaacaga
accacggggctgatcactgtcgcgccgggggtggaactgatagtcgggcggacttacgcg
ctcacagtccaagccgcggataatgctccccctgcagagagaaggcactccatctgcact
gtgtacattgaagtgcttcctcccaataatcaaagccctcctcgcttcccacagctgatg
tatagtcttgaaatcagtgaagccatgaggattggtgctgtcttattaaatctgcaggca
actgaccgagagggggacccaataagatacgccattgagaatggagatcctcagggagtt
tttaatctttcagaaactacggggattctaaccttagggaaagcactggacagggaaagc
acggatcgctacattctgatcatcacagcgtcagatggcaggccggatgggacttccact
gccacagtgaatgtggtggtgacagatgtgaatgacaatgctccggtatttgatccctat
ctgcctagaaatttatctgtggtagaggaagaagccaatgcctttgtgggtcaagtgagg
gcaacggaccctgatgctggaataaatggccaagtgtactacagtttgggcaacttcaat
aatctttttcgcatcacgtctaacgggagcatttacacagcagtgaagcttaacagagaa
gtcagagactactatgaactcgtcgttgtggcaacagatggagcagtacaccctcgtcat
tcaactctcacactggccatcaaggttttggatattgatgataatagtcccgtgttcacc
aattcaacatacactgtcgtagttgaagagaatctgccggctgggaccaccttccttcga
atagaggccaaagatgttgaccttggagcaaatgtttcttaccggataagaagcccagaa
gtgaagcacttttttgcactacatccgttcacgggagaactgtcccttttaaggagttta
gattatgaggcatttccagaccaagaagccactattacttttctggtggaggcctttgat
atttatggaacgatgccacctggtattgctactgtcacagtgatagtaaaggatatgaat
gattatcctcctgttttcagtaaacgactctacaaggggatggtggctccagacgcggtc
aagggtacccccatcacaacagtttacgcagaagacgcagaccctcctggattacctgca
agtcgcgtaaggtacagagtagatgatgtcctgtatccttatcctgccagtatttttgat
gtagaagaagattcaggaagagtaatcactagagtcaatcttaatgaagaacctacaaca
atttttaagttggtggtggttgcttttgatgatggtgagcctgtgatgtctagcagtgcc
actgtgaagattcttgttttacatcctggagaaatcccacgcttcacacaagaggaatac
agacctccaccagtaagtgaacttgcccccagggggacgatggttggtgtaatttctgct
gccgccattaatcagagtatagtgtactccatcgtttcaggaaatgaagaagacaagttt
ggaattaataatatcacaggcgtcatctatgtgaatgcccctctggattatgagaccagg
acaagctacgtacttcgagtccaagctgattccctagaggtggtccttgccaatctccga
gttccttcaaagagcaatacagcgaaagtatacattgaaattcaggatgaaaacgatcat
gccccagtgtttcagaaaaaattctacattggaggagtgtctgaagatgcaagaatgttt
gcttctgtgctcagagttaaggctactgataaagatactggtaattacagtgccatggcg
tacagactcataatacccccaattaaagaaggaaaagaaggatttgtggtagagacgtat
acagggctcatcaaaaccgctatgctcttccacaacatgaggaggtcttacttcaagttt
caagttattgcaactgacaactatgggaagggcctgagcggcaaagcagacgtgcttgtc
tctgtggtgaatcagctggatatgcaagttattgtttccaatgtgcccccaactctagtg
gaaaaaaagatagaagatcttacagagattttggatcgctacgttcaggagcaaattcct
ggtgccaaggttgtggtggagtccatcggtgctcgccggcatggagatgccttttctcta
gaagattacaccaaatgtgacctgacagtctatgcaattgaccctcaaaccaacagagcc
atcgacagaaatgagctttttaaatttttagatggcaagctgcttgatatcaataaagac
tttcagccatattacggggaaggaggacgtattttggagatccggactccagaggcagtg
accagcattaagaagcgaggagaaagtctaggatacacagaaggggccttgctggctctg
gctttcatcatcatcctctgctgcattcccgccatcctggtcgttttggtcagctacaga
cagtttaaagtacgccaagctgagtgcaccaagactgcgcgaattcaatccgcgctcccc
gcggctaagccagcagccccagccccggcgcccgtggccgcgcccccgcccccgccgcca
cctcccggtgcacatctctatgaagaacttggagacagcacaatgcataagtatgaaatg
cctcaatatggaagtcgccgccgattgttaccaccggctggacaagaggaatatggtgag
gtggttggtgaagctgaggaggaatatgaggaggaagagtgggcgagaaaaagaatgatc
aaattagttgtcgatcgagagtatgaaaccagctcaacgggagaagacagcgctaccgaa
tgtcagaggagccgtcttcacaatcctaatatccacagtaatatcaacggcaatatatat
attgcccagaacggttctgtggtgagaactcgccgtgcctgcctcaccgataacttaaaa
gtttcttcaccggtccgactgggaaggcactttaagaaactagacaagttggcagtgaca
catgaggaacatgtgcccctgaacacgttgtcaaaggggccgttctctactgagaaagtg
aacacaagaccaactctggttacctttgccccttgccccgtggggaaggagggtatagca
gcgaagcccgtggggaacagactgaaaagcacagttgaacaggagcccatgactgacccc
aagaacgtcaaggaggccttggaatttcacagcgaccacacgcagtcggatgaggaagag
ctttggatgggcccctggagcaacctccatataccaatgacaaaactgtga

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