Otolemur garnettii (small-eared galago): 100961250
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Entry
100961250 CDS
T07855
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X2
KO
K12473
low-density lipoprotein receptor
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03272
Virion - Hepatitis viruses
oga04144
Endocytosis
oga04913
Ovarian steroidogenesis
oga04925
Aldosterone synthesis and secretion
oga04927
Cortisol synthesis and secretion
oga04934
Cushing syndrome
oga04976
Bile secretion
oga04979
Cholesterol metabolism
oga05145
Toxoplasmosis
oga05160
Hepatitis C
oga05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100961250 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100961250 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100961250 (LDLR)
04925 Aldosterone synthesis and secretion
100961250 (LDLR)
04927 Cortisol synthesis and secretion
100961250 (LDLR)
09154 Digestive system
04976 Bile secretion
100961250 (LDLR)
04979 Cholesterol metabolism
100961250 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100961250 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100961250 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100961250 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100961250 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oga04131
]
100961250 (LDLR)
Membrane trafficking [BR:
oga04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100961250 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
EGF
EGF_LRP2
EGF_3
hEGF
NBP1
Motif
Other DBs
NCBI-GeneID:
100961250
NCBI-ProteinID:
XP_012665677
Ensembl:
ENSOGAG00000016055
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MGLGGWRLRWIVALLLVAAGTAEDRCERNEFQCQDGKCISYKWVCDGSPECPDGSDEFPQ
TCMSVTCKSVDFSCGGRVNRCIPQFWRCDGQVDCENGLDEQGCPAKTCSQDEFRCHDGKC
ISQQFVCDSERDCLDGSDEASCPVTTCSPANFQCNDSTCIPDLWACDGDPDCKDGSDEWP
DRCGGRETLATQGNNGPCSSHEFHCHSGECIHSSWHCDGGPDCKDESDEENCAVSTCRPD
EFQCLDGTCVHGSRQCDWEYDCKDMSDEHGCINVTRCEGPNKFKCHSGECITLDKVCNSV
RDCRDWSDEPIKECGTNECLDNNGGCSHICNDLKIGYKCLCPDGFQLVDQRRCEDIDECQ
DPDTCSQICVNLEGSYKCECEDGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEY
TSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDGAHGFSSYDTVISGDLQAPDGL
AVDWVHGNIYWTDSVLGTVSVADTKGMKRKTLFKEKGSKPRAIVVDPVHGFMYWTDWGTP
AKIKKGGLNGVDVYSLVTEGIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVL
EDKKRLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSDINLVAENLLSPEDIVLFHNFT
QPKGVNWCERPTLRNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAKDMRSCLTEAESLV
TTQGTSTSRPLVTSKTVAPKHTVTWPAPDTSRLTTAEIVTMSFQALGDIAGRENKEKPGS
VGALSIVLPIAILVLLCFGAFLVWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYA
YPSRQMVSLEDDVA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggggctcggtggctggaggctgcgctggatcgtcgccctgctcctcgtcgcggcgggg
actgcggaagacagatgtgagagaaacgagttccagtgtcaagatgggaaatgcatctcc
tataagtgggtttgtgacggcagccccgagtgcccagatggctctgatgagttcccgcag
acctgcatgtctgtcacctgcaaatcagtggacttcagctgtgggggccgcgtcaaccgc
tgcatccctcagttctggagatgtgatggccaagtggactgtgaaaatggcttggatgag
caaggctgtccagccaagacatgctcccaagatgaattccgctgccatgatggcaagtgc
atctcccagcagtttgtgtgtgactcagaacgggattgcttggatggctcagatgaggcc
tcatgccccgtgaccacctgtagccctgccaacttccagtgtaatgattccacctgcatc
cctgatctatgggcttgtgatggtgaccctgactgcaaggatggctcagatgagtggcca
gaccgctgtgggggccgagaaacattagccacccaagggaacaatggtccctgctcctcc
cacgagttccactgccatagcggcgagtgcatccactccagctggcattgtgacggtggt
cctgactgcaaggacgagtccgatgaggagaactgtgctgtgtccacctgccgccctgac
gaattccagtgcctagatgggacctgtgtccatggcagccggcagtgtgactgggagtat
gactgcaaggacatgagtgatgaacatggctgtatcaatgtgacacgttgtgaaggaccc
aacaagttcaaatgccacagtggtgaatgtataacccttgacaaagtgtgcaactcagta
cgggattgccgggattggtcggatgagcccatcaaagagtgtggcaccaacgagtgtttg
gacaacaatggaggctgctcccatatctgcaatgacctcaagattggttacaagtgtctg
tgtcctgacggcttccagttggtggaccagcgaagatgtgaagatatcgacgaatgtcag
gaccctgacacctgcagccagatctgtgtgaacctggaaggcagctataagtgcgagtgt
gaagatggctttcagctggacccccacaccaaggcctgcaaagcagtgggttccattgcc
tacctcttcttcaccaatcgtcatgaggtaaggaagatgaccctagacaggagtgagtac
accagcctcatccccaacctgaagaacgtggttgctctggacacagaggtggccagcaac
agaatctactggtctgacctgtcccagagaaagatttacagcacccagattgatggagcc
cacggcttctcctcctatgataccgtcattagtggagacctccaggcccccgatgggctg
gctgtggactgggtccatgggaacatctactggaccgactctgttttgggcactgtctct
gtggctgatacaaagggtatgaagaggaaaacactatttaaggagaaaggatccaagcca
agggccatcgtggtggatcctgttcatggcttcatgtactggactgactggggaacccct
gctaagatcaaaaaagggggcctgaatggtgtggatgtgtactcgctggtgacagaaggc
atccagtggcccaatggcatcactctggatctttccagtggtcgcctctactgggttgac
tccaaactccactccatctccagtattgatgtcaatggtggcaaccggaagacagtgttg
gaggacaagaagagactggcccatcccttctccttggccatctttgaggacaaagtgttt
tggacagacatcatcaatgaagccattttcagtgccaatcgcctcacgggctccgacatt
aatttggtggctgaaaacctattgtcccctgaggatattgtcctcttccacaacttcaca
cagccaaaaggggtaaactggtgtgagaggcccactctccgaaatggtggctgccagtac
ctgtgtcttcctgccccacaaattaacccacactcgcccaagtttacctgtgcctgccca
gatggcatgttgctagccaaggacatgaggagctgcctcacagaggctgagtctttagtg
accacccagggcacctccacgagcaggcctctggtcacctctaaaactgtggcgccgaag
cataccgtcacctggcctgctcctgatacctctcggctcaccacagcagagatagtgacg
atgtcattccaagccctgggtgacatcgccggcagagagaataaggagaaacctgggagt
gtgggcgctctgtccattgtcctccccatcgcaattcttgtcctgctctgctttggagcc
ttcctggtctggaagaattggaggctgaagagcatcaatagcatcaacttcgacaaccct
gtgtaccagaagaccacggaggacgaggtgcacatctgccgcagccaggacggctacgcc
tacccctcgagacagatggtcagcttggaggatgatgtggcatga
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integrated database retrieval system
