KEGG   Otolemur garnettii (small-eared galago): 105887360
Entry
105887360         CDS       T07855                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3C-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03250  Viral life cycle - HIV-1
oga05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105887360
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    105887360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oga03019]
    105887360
Messenger RNA biogenesis [BR:oga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105887360
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC4_like APOBEC_C APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase MafB19-deam
Other DBs
NCBI-GeneID: 105887360
NCBI-ProteinID: XP_023371224
LinkDB
Position
Unknown
AA seq 343 aa
MKPYCPRQRGGQGQGYRMIPQIRGPMERMYLKTFYYHFDNRPYLSRRNDTWLCFEVKTTS
SNSPGSYSGVFRNQGPRSCPWHTELCFLTWVRPLLSHHDCYQITWYMSWSPCDNCAGQVA
SFLATHENVSLTIYTARIYYFWKQDHRQGLLRMIEEGTQVYIMSSKEFQHCWENFVDHWG
TCWVTRWNRLKKNYEFLVTKLNEILSDPMKRITPNTFYNQFHNRTGQKDTWLCFEVKEKE
NSNSSGSCPRRGVFRNQVFSKTTSHAEVGFLTWFQKEMPPNHHYEVTWYTSWSPCARCAW
HVVNFLTSNPKVSLTIFAARLYYIYRPEIQQGLRRLFQEGARV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgaaaccttactgccccagacaaagaggagggcagggacaaggctacaggatgattcca
cagatcagaggcccgatggagcgaatgtatctgaaaacattctactaccactttgacaac
agaccctacctctctcgtcgcaatgatacctggctgtgctttgaggtgaaaacaaccagc
agcaactcacctggctcctacagtggggtctttcgaaatcagggccctcgatcttgtcct
tggcacacagagctgtgcttcctgacctgggtcaggcccttgctgtcccatcacgactgc
taccagatcacctggtacatgtcctggagtccctgtgacaactgtgcggggcaagtggcc
tcctttctggccacacatgaaaatgtgagcctgaccatctacactgcccgcatctactac
ttctggaaacaggatcaccgccaggggctgctcaggatgattgaggaagggacccaggtg
tacatcatgtcctctaaagaatttcaacactgttgggagaactttgtggaccattgggga
acgtgttgggtcacacgttggaacagactgaagaaaaattatgagttcctggtcaccaag
ctgaatgaaattctcagtgacccgatgaagcgaataactccaaacacattctacaaccag
ttccacaacagaactggtcagaaggacacctggctgtgctttgaggtgaaagaaaaggag
aatagcaactcatctggctcctgtcccaggagaggggtcttccgaaaccaggtcttttcc
aagaccacctctcatgccgaagtgggcttcctgacttggttccagaaggagatgccccct
aaccaccactatgaggtcacctggtacacatcctggagtccctgcgctcgctgtgcatgg
cacgtggttaactttctgaccagtaacccaaaagtgagcctgaccatctttgctgcccgc
ctctactacatatatcgcccagaaatacagcagggccttcgcaggttatttcaggaaggg
gccagagtgtga

DBGET integrated database retrieval system