KEGG   Otolemur garnettii (small-eared galago): 105888469
Entry
105888469         CDS       T07855                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3C-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03250  Viral life cycle - HIV-1
oga05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105888469
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    105888469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oga03019]
    105888469
Messenger RNA biogenesis [BR:oga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105888469
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC4_like APOBEC_C APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase MafB19-deam
Other DBs
NCBI-GeneID: 105888469
NCBI-ProteinID: XP_023364964
LinkDB
Position
Unknown
AA seq 351 aa
MIPQIREPKMGMSPGTFSFHFNNRPILSFRNDNWLCFEVKRNKDNLHTPPHSGVFHNQGH
QHSRLHTEVCFLTWVRSQLSRDHCYQVTWYLSWSPCVDCALQIADFLDEHPNVNLTIYVA
RLYYFWRLYFRWGLRRMVEHGAQVHIMSSEVPEKAGDTQGYAGLGEAHDPMMGISPNIFY
NQFHNRTGQKDTWLCFEVTEKENSNSSGSCPRSGVFRNQGPPSTPCHAEVRFFTWFQKVL
SPDLHYQVTWYISWSPCADCADLVVDFLAKHRNVNLTIFTARLYYHHIPEMHCGLRRMYE
EGARVYIMSVKEFEYCWDNFVYNKGKQFVPWNGLNENYKSLVSKLKKILGL
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgattccacagatcagagagccgaagatgggaatgtccccaggtacattctccttccac
tttaacaacagacccatcctttccttccggaatgacaactggctctgctttgaggtgaaa
agaaacaaggacaacttacacaccccacctcacagtggggtctttcataaccagggccat
caacattctcgtttgcacacagaagtgtgcttcctgacctgggtcaggtcccagctatct
cgtgaccactgctaccaggtcacctggtacttgtcctggagtccctgcgttgactgtgcg
ttgcaaattgctgacttcctggacgaacatccaaatgtgaacctgaccatctatgttgcc
cgcctctactacttctggagactgtatttccgctgggggctgcgcaggatggttgagcac
ggggcccaggtgcatatcatgtcctctgaagttcctgagaaggcaggggacactcagggc
tatgcagggctgggggaggctcatgacccgatgatgggaatatctccaaatatattctac
aaccagttccacaacagaactggtcagaaggacacctggctgtgctttgaggtgacagaa
aaggagaatagcaactcatctggctcctgtcccaggagtggggtcttccgaaaccagggc
cctcccagtactccttgccatgcagaagtacgcttcttcacttggttccagaaggtgctg
tcccctgacctccactaccaagtcacctggtacatatcctggagtccctgtgctgactgt
gcagatcttgtggttgattttctggctaaacacagaaatgtgaacctgaccattttcact
gcccgcctctactaccaccatatcccagaaatgcattgtggacttcgcaggatgtatgag
gaaggggcccgtgtgtacatcatgtctgttaaagaatttgaatactgttgggacaacttt
gtgtacaacaagggaaagcaatttgtgccttggaatggattgaatgaaaattataaatcc
ctggtctccaagctgaaaaagattctcggcctctga

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