Oryza glaberrima (African rice): 127761124
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Entry
127761124 CDS
T08853
Name
(RefSeq) probable tocopherol cyclase, chloroplastic isoform X1
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00130
Ubiquinone and other terpenoid-quinone biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
ogl01240
Biosynthesis of cofactors
Module
ogl_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
127761124
Enzymes [BR:
ogl01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
127761124
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Motif
Pfam:
Tocopherol_cycl
Isochorismatase
Motif
Other DBs
NCBI-GeneID:
127761124
NCBI-ProteinID:
XP_052141308
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Position
2:complement(9926383..9955997)
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AA seq
639 aa
AA seq
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MDLAAAAVAVSFPRPAPPPRRCAPRRHRRALAPRAASSSPSPSTAVAAPVYAPTPRDRAL
RTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDRVIHGSRF
TGVGAQILGADDKYICQFTEKSNNFWGSRHELMLGNTFIPNNGSTPPEGEVPPQEFSSRV
LEGFQVTPIWHQGFIRDDGRSKYVPNVQTARWEYSTRPVYGWGDVTSKQKSTAGWLAAFP
FFEPHWQICMAGGLSTGWIEWDGERFEFENAPSYSEKNWGAGFPRKWYWVQCNVFSGASG
EVALTAAGGLRKIGLGETYESPSLIGIHYEGKFYEFVPWTGTVSWDIAPWGHWKLSGENK
NHLVEIEATTKEPGTALRAPTMEAGLVPACKDTCYGDLRLQMWEKRNDGGKGKFLLHYLK
KRWLSPRISTSPSKSRRSMAAAAAGGGGAKWSETAMLVIDMQKDFVDPAMRSPMLVDGGQ
AVVPTVAEAVAVARERGIYVVWVVREHDPSGRDVELFRRHFYSSGKGLGVEGSKGAELAD
GLTIKDGDYKLVKTRFSAFFATHLDSVLKTSGIKNLVIVGVQTPNCIRQTVFDAVALDYD
KVAVIIDATAAAKPEIHLSNMIDMKNIGVETPTLEEWRR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgccgccgccgccgtggccgtctccttcccacgccctgctcccccgccgcgc
cgctgcgccccacgccgccaccgccgcgccctcgctccgcgcgcggcctcctcctccccc
tccccctccacggcggtggcggcgcccgtctacgcccccacgccgcgggaccgggccctg
cggacgccgcacagcgggtatcactatgacggcacggcgaggcccttctttgagggatgg
tacttcaaggtgtccattcccgagtgcaggcagagcttctgcttcatgtactctgtcgag
aacccgttgttccgagatgggatgagtgatctggatcgggtcatacatggttcgcgcttc
actggcgtcggggcgcagattctcggtgccgatgataagtacatatgccagttcaccgag
aaatccaataacttttggggaagtaggcatgaactaatgctcggaaacactttcattccc
aataatggttcaacacccccagaaggggaggttccccctcaggaattttctagtcgagtt
ttggaaggcttccaagtgacaccgatttggcatcaaggctttatacgtgatgatggaagg
tcaaagtatgtgccaaatgtccaaacagctaggtgggagtacagcactcgaccagtatat
ggctggggtgatgtcacgtcaaagcagaaatcaactgctggttggcttgctgcttttcct
ttctttgaacctcattggcaaatatgcatggctggtggcttatccacaggatggattgaa
tgggacggagagcggtttgaatttgaaaatgctccttcttattcagaaaagaactggggt
gcaggttttccgaggaagtggtattgggtccaatgcaatgtcttctcaggcgcatctggt
gaagttgcattaacggctgctggcggattaaggaaaattggattgggcgaaacctatgaa
agtccttcactgattggaattcattatgagggaaaattctatgaatttgtgccttggacc
gggacagtaagctgggacattgccccttggggtcactggaagttgtccggcgagaacaaa
aatcatctggttgaaatagaagcaaccacaaaagaaccaggcactgctttgcgagctcca
accatggaggctggactagtgccagcatgcaaagacacctgctatggtgatctgaggctg
caaatgtgggaaaagagaaatgatggtggcaagggaaagttcctcctccactacctcaag
aagcgctggctctccccgaggatctcgacttccccgtccaaatcgcggcgatccatggcg
gcggcggcggcgggcggcggtggcgccaagtggagcgagacggccatgctcgtcatcgac
atgcagaaggatttcgttgacccggcgatgcggagcccgatgctggtggacggcggccag
gcggtggtccccaccgtcgccgaggcggtcgccgtcgcgagggagcgcggcatctacgtc
gtctgggtggtcagagagcatgacccttctgggagagacgttgaactttttcgcaggcac
ttctattctagtggcaagggcctaggggtggaaggttccaaaggtgctgagctcgctgat
gggcttactatcaaagatggggattacaagttggtgaagactaggttcagtgctttcttt
gcaacgcaccttgattctgtcctcaagacctctggaataaagaacttggttattgttggg
gttcaaacaccaaattgcattcgacagacagtctttgatgctgtagcactggactacgac
aaagttgctgtcattattgatgcaacagctgctgctaagccggagatccatttatcaaac
atgatagatatgaagaatatcggagtggaaacaccaaccttggaggaatggagacgttga
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