Oryza glaberrima (African rice): 127762258
Help
Entry
127762258 CDS
T08853
Name
(RefSeq) 4-coumarate--CoA ligase 3 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00130
Ubiquinone and other terpenoid-quinone biosynthesis
ogl00940
Phenylpropanoid biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Module
ogl_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
ogl_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
127762258
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
127762258
Enzymes [BR:
ogl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
127762258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
TusA
Motif
Other DBs
NCBI-GeneID:
127762258
NCBI-ProteinID:
XP_052142661
LinkDB
All DBs
Position
2:4005973..4011353
Genome browser
AA seq
554 aa
AA seq
DB search
MGSVAAEEVVVFRSKLPDIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVES
ASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEVHRQA
EAAGARVIVTEACAVEKVREFAAERGVPVVTVDGAFDGCVEFREVLAAEELDADADVHPD
DVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFSKDDVILCLLPLFHIYSL
NSVLLAGLRAGSTIVIMRKFDLGALVDLVRKHNITIAPFVPPIVVEIAKSPRVTAEDLAS
IRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCG
TVVRNAELKIVDPDTGASLGRNQSGEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDI
GFVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVA
FIVRTEGSEITEDEIKKFVAKEVVFYKRINKVFFTDSIPKNPSGKILRKDLRARLAAGIP
DAVAAAAADAPKSS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggggtcggtggcggcggaggaggtggtggtgttccggtcgaagctgccggacatcgag
atcgacaacagcatgacgctgcaggagtactgcttcgcgaggatggcggaggtcggggcg
cggccgtgcctgatcgacgggcagaccggggagtcgtacacgtacgcggaggtggagtcc
gcgtcgcggcgcgccgcggcggggctccggcggatgggggtgggcaagggcgacgtggtg
atgagcctcctccgcaactgccccgagttcgccttctccttcctcggcgcggccaggctg
ggcgccgccaccacgacggcgaacccgttctacacgccgcacgaggtccaccgccaggcg
gaggccgcgggcgccagggtgatcgtcaccgaggcgtgcgccgtcgagaaggtgcgggag
ttcgccgcggagaggggcgtccccgtggtcaccgtggacggcgcgttcgacggctgcgtg
gagttccgcgaggtgctcgccgcggaggagctcgacgccgacgccgacgtccaccccgac
gacgtcgtcgccctcccctactcctccggcaccaccggcctccccaagggcgtcatgctc
acccaccgcagcctcatcaccagcgtcgcccagcaggtggatggagagaaccctaacctg
tacttcagcaaggatgatgttatactatgcctgctgccactgttccacatctactcgctc
aactccgtgctgctggctggcctgcgtgccgggtcgaccatcgtgatcatgcggaagttt
gatcttggcgcgctcgtcgaccttgtgcgcaagcacaacatcactatcgcccccttcgtg
ccccccatcgtggtggagatcgccaagagcccccgcgtcaccgcggaggacctcgcctcc
atccgcatggtcatgtccggtgccgcgcccatggggaaggaccttcaggatgcattcatg
gccaagatccccaatgccgtcctcggacagggttacggtatgactgaggctgggccagtg
ctggcaatgtgcctggcgtttgccaaggagcccttcaaggtgaagtccgggtcgtgcggt
acagtggtgcgcaacgcggagctgaagatcgtcgaccccgacaccggcgcctccctcggc
cggaaccagtccggcgagatctgcatccgcggagaacagatcatgaaaggctatctgaat
gatcctgaggcgaccaagaacaccatcgacgaggacgggtggctgcacaccggagacatc
ggcttcgtcgacgacgacgacgagatcttcatcgtggacaggctcaaggagatcatcaag
tacaaggggttccaggtgccaccggccgagctggaggcgctgctcatcactcacccggag
atcaaggacgccgccgtcgtctcgatgaaggatgatcttgccggtgaagtgccagtcgcc
ttcattgtccggacagaaggctcagaaatcaccgaggatgagatcaagaaattcgttgca
aaagaggtggtgttctacaagaggatcaacaaggtgttcttcaccgattccatccccaag
aacccttccggcaagatcctcaggaaggacttaagagccaggctcgccgccggcattccc
gacgccgtcgccgccgccgccgccgatgcgcccaaaagcagctaa
DBGET
integrated database retrieval system
