Oryza glaberrima (African rice): 127762834
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Entry
127762834 CDS
T08853
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127762834
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127762834
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127762834
Enzymes [BR:
ogl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
127762834
Amino acid related enzymes [BR:
ogl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127762834
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127762834
Prokaryotic type
Other AARSs
127762834
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
127762834
NCBI-ProteinID:
XP_052143297
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All DBs
Position
2:complement(4379727..4396134)
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AA seq
1097 aa
AA seq
DB search
MDEVCEGKDFSFPAEEERVLRLWEELDAFHEQLRRTAGGEEFVFYDGPPFATGLPHYGHL
LAGTIKDAVARHHAMRGRHVARRFGWDCHGVPVERAVDEALRIATRAQVLEMGVASYNDA
CRGVVTRYVAEWEAVVTRMGRWVDFEDGYKTMDIKFMESVWWVFAQLWDKDLVYKSFKVM
PYSTGMKTPLSNFEAGQHRQFVPAETAMVSFPVVGDVDNAALVAWTTTPWTLPSNLALCV
NAKFVYAKVKDKSNGSVYIVAETRLDQLPVTVKVTGKKPGPSKGSSGAAKNGLDTESYEL
LEKIHGSSLVGLRYTPLFDYFSELQDTAFRVVADNCVADDTGTGVVHFAPAFGEDDYRVC
LASGIVEGTDLVVAVDDDGFFKDKISEFNGLLVTDKETNKYVINAVKKKGRLVSHGSVIH
KYPYCWRSNTPLIYRAVPSWFIRVERIRDQLLECNKETYWVPDYVKEKRFHNWLEGARDW
AVSRTRFWGTPLPLWISQDGEEIIVMDSVDKLEKLSGVKISDLHRHHIDGITVPSQRGEE
FGALKRVDEVFDCWFESGSMPYAYIHYPFENRELFEKNFPGDFIAEGLDQTRGWFYTLMV
LSTALFGKPAFKNLICNGLVLAEDGKKMSKSKNNYPSPMEVIDNYGADALRLYVINSPVV
RAESLRFNKNGVHGVVKDVFLPWYNAYRFLVQNAKRLEVEGLAVFSPINQAILLRSSNVL
DHWIQSATESLVSFVREEMDAYRLYTVVPYLVKYIDNLTNIYVRFNRKRLKGRTGEDDCR
ISLSTLYHALVTTCVVMAPFTPFFTEVLYQNLRKVSSKSEKSIHFCNFPSSTGQIDERVE
HSVNRMMTIVDLARNIRERHNRPLKTPLREMVVVHPDNDFLEDITGKLKEYVKEEMNVKM
VTACSDPLVYSSLRAEPNFSVLGKRLGKDMGKISNEVKKMTQDQILTFEESGEIFFGSHL
LTLEDIKVFREFKRPANVSEKEIDAAGDGDVLVILDLQVDQSLFEAGVAREVVNKIQKLK
KTAQLRLTDPVDVYYSSQDSSDSSLEKILQSQDQYIRDALGSPLTSKAQAQPNVEVICEE
AYNVRGMSFVIYVARKQ
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggtgtgcgaggggaaggacttctccttcccggcggaggaggagcgggtcctc
cgcctctgggaggagctcgacgccttccacgagcagctccgccgcacggcgggcggcgag
gagttcgtcttctacgacgggccccccttcgccacgggcctcccgcactacggccacctc
ctcgcgggcaccatcaaggacgccgtcgcccgccaccacgccatgcgcggccgccacgtc
gcccgccgcttcggctgggactgccacggcgtccccgtcgagcgcgccgtcgacgaggcc
ctccggatcgccacccgcgcccaggtgctcgagatgggggtcgccagctacaacgacgcg
tgccgcggcgtcgtcaccaggtacgtcgccgagtgggaggccgtcgtcacgcgcatgggg
aggtgggtcgatttcgaggacgggtacaagaccatggacatcaagttcatggagagcgtg
tggtgggttttcgcgcagctgtgggacaaggaccttgtctacaagagttttaaggtgatg
ccttacagcactggcatgaaaacaccattgtcgaactttgaggcaggacagcaccgccag
tttgttccggccgaaacagccatggtgtccttccctgttgttggtgatgtggacaatgca
gctcttgttgcatggacaacaacaccctggacgctacctagcaacctagcactctgtgtc
aatgcaaaatttgtttatgccaaggttaaggacaaatcaaatgggagcgtatatattgtt
gcagaaactaggctagaccaattgccggtcacggtcaaagttactggaaagaagccaggg
ccttcaaaggggagcagtggagctgctaaaaatggactggatactgaatcgtatgaacta
ctcgaaaagattcatggatcatccttggtaggccttagatatactcctttgttcgactat
ttctcagagctgcaggacaccgcatttagagtcgtagcagataactgtgtagctgatgat
actggaactggtgttgtacattttgcccctgcttttggtgaagatgattatcgtgtctgt
cttgcttcggggatagttgagggtaccgatcttgttgttgctgttgatgatgatggtttc
ttcaaagacaagatctccgaatttaatggtctacttgtcacagacaaagaaaccaacaaa
tatgtaatcaatgctgtaaagaaaaaaggaagacttgttagtcacggaagcgttatacat
aagtatccatactgttggagatctaatacacctctcatatatcgggcagttccaagctgg
ttcatcagagttgaaaggattagagatcagttgctggaatgtaataaggagacatactgg
gtgcctgattacgttaaggaaaagagattccataactggcttgaaggggctagagactgg
gctgttagccgaactagattctggggcactcctcttcctctatggatcagtcaagacgga
gaagaaataattgttatggactctgttgataaactcgaaaagttgtctggtgtcaagatt
agtgatcttcaccgacaccatatagatggcatcacagttccctctcagagaggggaagag
tttggggcgttgaaacgcgttgatgaggtttttgattgctggtttgagagtggatccatg
ccatatgcctacattcattacccatttgagaatcgcgaactgtttgaaaagaattttccc
ggagatttcatagccgaagggttggaccaaactcgtggatggttctatactctcatggtc
ctgtccacagctttgtttgggaaacctgcatttaaaaatcttatatgcaacggtctggtc
ttggctgaggatggcaagaaaatgagcaaaagtaaaaataattacccttcacccatggaa
gtcattgataattatggagcggatgccctgaggctatatgtaataaattctcctgttgtc
cgtgcggagtccctacgattcaacaaaaatggtgtccatggtgtggtgaaagatgtcttc
ctcccatggtataatgcttatagatttcttgttcaaaatgctaagaggcttgaagttgag
ggtcttgctgtattttcaccaatcaatcaagctattcttctgaggtcatctaatgtgcta
gatcactggatacagtccgctactgaaagtctagttagttttgttcgagaggagatggat
gcatataggctttacacggttgtcccttatttagtaaagtacattgacaaccttaccaac
atatatgtgcgtttcaatcgcaagcgtctgaaaggtcgtactggagaagatgactgcagg
atttctctttcaacactttaccatgcgcttgtaacaacttgtgttgtgatggctccgttt
actcccttcttcactgaagttctgtaccagaacttaagaaaggtgtccagcaaatcagaa
aagagcattcatttctgcaatttcccttcctcaactgggcagatagatgagcgtgttgag
cacagtgtcaacaggatgatgaccatcgttgatcttgctcgaaatattcgggagcggcat
aacagacctttgaaaacaccattaagggagatggtagttgtgcatcctgacaatgatttt
cttgaagacataactggaaagctgaaagagtatgtcaaggaggagatgaatgtcaagatg
gtcactgcttgtagcgatcccttagtgtattcatctttacgtgctgaacctaacttcagt
gtgttaggcaaaagattaggaaaagacatgggcaaaatatcaaatgaggtgaagaagatg
actcaggatcagatcctaacatttgaggaaagtggcgaaatattttttggcagtcatctc
ttgacgttggaagatattaaggtttttcgagaattcaagcgccccgcaaatgtgtcagag
aaggaaattgatgctgcaggagatggcgatgttttggttatcttggatctccaagttgat
caatcattgtttgaagctggagttgctcgtgaggttgtgaacaaaattcagaagttgaaa
aagactgctcagctgagactgaccgacccagttgatgtttactacagttcacaggatagc
agtgatagctctctcgaaaagattttgcaatcgcaggatcaatatattagagatgcactt
ggttcccctcttacctcgaaggcacaggcacaacccaatgtggaagtaatctgtgaggag
gcctacaacgtacgtggcatgtctttcgttatctacgtggcaaggaaacagtga
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