Oryza glaberrima (African rice): 127762917
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Entry
127762917 CDS
T08853
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127762917
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127762917
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127762917
Enzymes [BR:
ogl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
127762917
Amino acid related enzymes [BR:
ogl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127762917
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127762917
Prokaryotic type
Other AARSs
127762917
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
Glyco_hydro_94
Motif
Other DBs
NCBI-GeneID:
127762917
NCBI-ProteinID:
XP_052143410
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All DBs
Position
2:31684705..31695943
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AA seq
1180 aa
AA seq
DB search
MFFYLDDKLRDLRCTFSAQQWGPLPRTGPSWPKCTSPATSQSVSLNSGPQGERRVLGPTL
QRLRLARARQQPNPPLLASPVVLFSSLIPRRRRCGATPSSPWTSGWERGGLHSRSSARLP
RRMDAASCCRVFSTQRCRFPLRRLAPPISRRPFGTESTSELFAASTSKRRSRGPVMAAKK
AAEGAKQEEGKYKHTVDLPKTTFGLRANSVVREPELQKLWEENQVLKRVSERNTGATFVL
HDGPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFIPGWDCHGLPIELKVLKSLDKE
TLNALTPIKLRQKAAKFAKATVTTQMNSFKRFGVWADWDNPYLTLSPEYEAAQLEVFGQM
VMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHISKSMYAAFKITNLSKPGLLEEFLPN
LCLAIWTTTPWTIPANAAVAVNPELTYVVVELQSVLESESTSGGNQRKLGSILSPGSQKP
FIIVAADLVSALESKWGTKLIIQKSFPGSALEHCRYIHPVNGNECSVVLGGDYITTESGT
GLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQFSGLAVLGAGNAAVVNYLDE
QCSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRNAAMDAIRRVSWIPSQAENR
IVAMTSSRSDWCISRQRTWGVPIPVFYHVDSNEPLITEETIEHIKGIVSKKGSDAWWYMT
IEELLPEKYRDKASEYRKGTDTMDVWFDSGSSWAAVLAKRDGLNFPADIYLEGSDQHRGW
FQSSLLTSIATTGKAPYSSVITHGFVLDEKGFKMSKSLGNVVDPEKVIVGGKNSKQEPGY
GADVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENSVRYSDL
PKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRLYVGGRV
SFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLPFQHTLDDGSVAEFVFNLKWPVK
NEEWLSVPKDDVDFLSVILELRSEVNKILESARTGKLIGSSLEAKVYLHAENANTVSKLK
ELVSATNDADALHRLFITSEVEILPSVSSETTSGVSYTGTFSSERTGNIWIGVTRADGEK
CERCWNYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAVS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttatctcgatgacaaattgagggaccttcggtgcactttttccgcgcaacaa
tggggaccattaccgcggaccggcccaagttggcccaagtgcactagcccagccacgagt
caatcggtgtcactgaacagcgggccccagggagaacggcgcgttctgggccccaccctg
cagcgactccggctcgctcgagcgagacagcagccaaaccctccactcctcgcttctccg
gtggttctcttctcttctcttatcccccggagacgccgctgcggcgccaccccctcctcg
ccgtggacctcggggtgggagcgtggcggcctgcacagccggagctcagctcgcctgccg
cgtcggatggacgccgcctcctgctgccgcgtcttctcgacgcagagatgccgcttcccg
ctgcggaggctggcgccgccgatttcgcggcggccgttcggcacggagtcgacgagtgag
ctgttcgccgcgtcgacctcgaagcggcgctcccgggggcccgtcatggcggcgaagaag
gccgccgagggtgctaaacaagaagaggggaaatacaaacacacggtggatctaccaaag
acaacttttggcttgagagctaattctgttgtgcgggagccggagctccagaagttgtgg
gaggagaaccaggtgctcaagagggtatcagaaaggaacactggggctacatttgttctc
catgatggtcctccttatgctaatggtgatcttcatatgggccatgcactgaataaaatc
ctcaaagatattataaaccgttacaagctgcttcagaatcacaaagtttcttttattcct
ggatgggattgccatggccttccaatcgaattaaaagttctaaagtcactggacaaggaa
acattgaatgctctgacacctataaaattaaggcagaaggctgcaaaatttgctaaagcg
acggttactacacaaatgaattctttcaagcggtttggtgtatgggcagattgggacaac
ccttatctaactctgtcaccagagtatgaagctgctcagctagaagttttcggccaaatg
gttatgaaaggatatatctaccgcgggcgaaaacctgttcattggagtccgtcatcacgt
acagctttagcagaagctgagttggagtattcagaaaatcatatttccaaaagcatgtat
gctgcattcaagatcaccaatctgtctaagcctgggttgctggaggaatttctccctaat
ttatgcctagccatatggaccactactccatggacgattcctgctaatgctgctgttgct
gtgaaccctgagctcacttatgtagtagttgagctgcaatctgtactagaaagtgaatca
acatctggtggaaatcaacgaaagcttgggagtattttgagccctgggagtcagaaacca
tttatcattgtggctgctgatcttgtctcagctctagagtccaagtggggtacgaagctt
ataatccagaaatcatttcctgggtcagccttggagcactgcaggtatattcatcctgtg
aatggcaatgaatgttctgttgttcttggaggagattacataacaactgaatctggcact
ggccttgttcatactgcccctggccatggtcaggaagactacataacaggtttgaaatat
gggcttcctattgtgtctcctgtggatgatgaaggaaacttcactgctgaagctggacaa
ttcagtggtttagctgttctgggagctggtaatgccgcggttgtgaattatctggatgaa
cagtgttctctcattttagaggagccttacaaacacaagtacccctatgactggcggtct
aaagaaccaacaatattccgagcaactgaacaatggtttgcctcggtggatggtttccgt
aatgctgcaatggatgcaattaggcgagtatcttggattccttctcaggctgaaaatagg
attgtggccatgacttcaagccgttctgactggtgtatttcgcggcagagaacttggggg
gttcctattccggtcttctatcatgtagactcgaatgaacctcttataactgaagaaact
attgaacacatcaagggtatagtgtcaaagaaagggagtgatgcctggtggtatatgaca
attgaggaacttcttcctgaaaaatatcgtgataaagcatctgagtatcgcaagggaact
gatacaatggacgtttggtttgactctggctcctcatgggctgctgttttggcaaaaaga
gatggccttaattttccagcggatatataccttgaaggttcagaccaacaccgtggatgg
tttcagagctcattgttaaccagcattgctactacaggaaaggctccatattctagtgtt
ataactcatggttttgtactggacgaaaagggtttcaagatgagcaaatctcttggtaat
gtggttgatcctgagaaagtaattgttggtggtaaaaattcaaagcaagaacctggctat
ggagcagatgttcttcggctatgggtttctagtgttgattacactggagatgtgttggtt
ggtccacaaattttgcgccaaatgtctgacatgtaccgaaagctacgaggcacaatgcga
ttcctattgtcgaatctccatgattggaaaccagaaaattctgtgcgctacagtgatcta
ccgaaaattgacaagtatgcacttttccaactggaaaatgttgtgacttccatgaaggat
agctacgagaactaccaattctataaaatataccagatcctccaaagatttgctattgtt
gatctctccaatttctatttggatgttgcaaaggatcgactctatgttggtggccgagtt
agctttacaaggaaaagctgtcagacagtcctcagtgcgcatctgctctatcttgttaga
gccattgcccccattatgccacatctagctgaggatgtatggcagaacctaccgtttcaa
cacacactggatgatggatctgttgctgagtttgtttttaatctaaaatggccagttaag
aatgaagaatggctctcggttccaaaggatgatgttgattttctgagtgttatcctcgag
ttgagatcagaggtgaacaaaattttggagagtgctcgaacaggaaagctgataggctct
agcttagaggcaaaagtttatctccacgcggaaaatgctaacacagtgtccaaactaaag
gagctggtttcggcaaccaatgacgctgatgctctgcaccgcctgtttatcacatctgag
gtggagatccttccttccgtaagctccgaaactacatctggtgtatcctacactggaact
tttagcagtgagcgcaccggcaacatctggattggtgtgactcgcgccgatggcgaaaaa
tgtgagaggtgctggaattatacccgagacgttggatctttccttgaccatcctactctt
tgtgcccggtgccacggtgtcattgatctgccaccagttcctgctgccgcggctgtcagc
tga
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