Oryza glaberrima (African rice): 127767355
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Entry
127767355 CDS
T08853
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34-like isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127767355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127767355
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127767355
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127767355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-RING_4
HypA
DmmA-like_C
Peptidase_C4
FUSC-like
Motif
Other DBs
NCBI-GeneID:
127767355
NCBI-ProteinID:
XP_052148628
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All DBs
Position
3:2441882..2445878
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AA seq
415 aa
AA seq
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MLRDPLPPSFFSSSLNRAAPRLPKYITVGAAVRRAVRAAGAGRARARSLGQSVSLREERG
DPWQAWRTTRCRPSAAAAAAAVSCRGREIIGLAGGRRTQVLRATIPENSVSGSSVRGKLR
EMEMDLAVEQYGCVHYRRKCKIRAPCCGEIFDCRHCHNEAKDSLEVSISDRHEIPRHEIK
LVICSLCNKEQDVQQDCSNCGACLGKYFCAKCNFYDDDVSKNQFHCDGCGICRQVVLNLH
SCDGVMKYEPFLINLTITFYRTGGAENFFHCDKCGCCYSYVLKDSHHCVERAMHHNCPVC
FEYLFDSTKDISALHCGHTIHLECLYEMRSHQQFSCPVCLRSACDMSHAWQKLDQEVAAS
PMPVIYQKKMIWILCNDCGTTSNVQFHILGHKCPGCSSYNTRQTRAAPAAACSRV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctacgcgaccccctccccccctcgtttttctcctcttctttaaaccgcgccgcgccg
cgcctacccaaatatataaccgtgggtgcagccgtgcgccgagccgtgcgtgcagcaggc
gcaggccgtgctcgtgctcgctcgctcgggcagtcggtctccctccgcgaggagagagga
gacccttggcaagcgtggaggacgactcggtgccggccgagtgcggctgctgctgctgcg
gctgtctcctgccgtggccgcgaaatcatcgggttggccggtggtcggcgcacgcaggtg
ctaagagctacaatacctgagaattcagttagtggatcatcagttcgaggaaagctgcga
gaaatggagatggacttggcagtcgagcagtacggatgcgtgcattacaggaggaaatgc
aagataagggcgccctgctgcggcgagatcttcgattgcaggcactgccacaacgaagcg
aaggactcgttggaggtcagcatcagcgaccggcacgagatccctcgccatgaaatcaag
ctggttatctgctctctctgcaacaaagaacaggatgtacaacaggattgctccaattgt
ggggcatgcttgggtaaatatttctgcgcaaaatgcaacttttatgatgacgatgtatca
aagaaccaatttcactgcgatggatgtggcatatgcaggcaagttgtgctaaatctgcat
tcctgtgacggagtaatgaaatatgagccctttttgataaatctcaccatcacattttac
agaactggtggtgcagagaacttctttcactgtgacaaatgcggatgctgctacagctat
gtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataactgccctgtatgc
ttcgagtatctatttgactcaacaaaagacatcagtgcactgcactgcggacacacgatc
catctggaatgcctatacgagatgagatcccatcaacaattctcttgcccggtctgcctg
aggtctgcttgtgacatgtcccatgcatggcaaaagcttgatcaagaggttgcagcatcg
ccgatgccagtgatctatcagaagaagatgatatggatcctatgcaacgactgtgggacg
acatcgaacgtgcaattccacatattgggacacaagtgccccggatgcagctcttacaac
acccggcagacaagagccgcccctgctgccgcgtgctccagagtctga
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