Oryza glaberrima (African rice): 127769753
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Entry
127769753 CDS
T08853
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127769753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127769753
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127769753
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
127769753
NCBI-ProteinID:
XP_052151340
UniProt:
I1PPY9
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All DBs
Position
4:27810233..27814118
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AA seq
181 aa
AA seq
DB search
MEARRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLK
SLQLQLQMLVMGKGMAPVVPPELQQYMHYITADPSQIPPIRPSEPRPFQITHATQQRQSN
VESDFLSQMQNLHPSEPPQNFLRPPKLQLYTPEQQRRGLASSSGHNSGWITERNSSYNFL
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagaaggcctacccctaccaggagaagcagatctgctgagttccacaatttt
tcagaaaggaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctactt
ccaaattgcaccaagaccgacaaagtttcgatgctggatgaagcgatcgactacctgaaa
tcactccaactacaactccagatgctggtcatggggaagggaatggcaccggttgttcct
cctgagctgcaacaatacatgcactatatcacagctgatccttctcaaattcctcccata
cgcccctccgagccgcggccatttcagataacccacgccacccaacagagacagtctaac
gtcgagtcggatttcttgagccagatgcagaatttgcacccttcagagccacctcaaaat
ttcctcagaccaccaaaattgcagttgtacacgccggagcagcagagaagaggtctagct
agtagcagtggccacaacagcggttggatcacggagaggaattcatcgtacaacttcttg
gagtga
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