Oncorhynchus gorbuscha (pink salmon): 123989500
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Entry
123989500 CDS
T07892
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00280
Valine, leucine and isoleucine degradation
ogo00650
Butanoate metabolism
ogo00900
Terpenoid backbone biosynthesis
ogo01100
Metabolic pathways
ogo03320
PPAR signaling pathway
Module
ogo_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
123989500 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
123989500 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
123989500 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
123989500 (hmgcs1)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
123989500 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
123989500
NCBI-ProteinID:
XP_046146516
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Position
LG11:77287573..77302367
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AA seq
549 aa
AA seq
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MIVSLCIEDLLDSPDPRYIDLLHPNSSYRMPGSAPANGEATWPKDVGIIALEIYFPSQYV
DQAELEQFDGVSAGKYTVGLGQARMGFCSDREDINSLCLTVVQRLMERNGLSYDQVGRLE
VGTETIIDKSKSVKTVVMQLFEESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGR
YALAVAGDIAVYATGSARPTGGAGAIAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMAS
EYPVVDGKLSIECYLSALDCCYSVYRNKIHAQWQREGVDKRFSLEDFGYMVFHSPYCKLV
QKSLARLVLSDFLSHPRSNTETGPFSGLEAFREVKPEETYFNRDVEKAFMKASTEMFDQK
TKASLLVSNQNGNMYTPSVYGCLASVIAQHTPQHLAGQRIGLFSYGSGFAATLYSLRVSQ
DATPGSGLDKLCASLCDLKARLDSRRKVSPAMFAENMQLREDTHHLAPYVPQGAVEELFP
GTWYLTRVDEKHRREYSRRSLNDDLPLEAGLVNSTTATEQHIPSPVKKMPRLPASTAGPE
AVTVSNGDH
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagcctctgcatagaagacctgctcgacagccctgatcctcgctacattgac
ctccttcaccctaacagctcatacagaatgcctggatcagccccagccaacggcgaggcc
acgtggcccaaagatgtgggcatcatcgccctggagatctacttcccctcacagtacgtg
gaccaggccgagctggagcagtttgatggcgtgtcggccggcaagtacacggtgggccta
ggccaggcgcgtatgggcttctgctcggaccgcgaggacatcaactccctctgcctgacg
gtggtccagcggctgatggaaaggaacggcctctcctacgaccaggtgggccgtttggag
gtgggcactgaaaccatcatcgacaagtccaagtcagtgaagacggtggtgatgcagttg
ttcgaggaatcgggcaacacggatgtggaggggattgacacgaccaacgcttgctatggg
ggcaccgccgccctcttcaacgccgtcaactgggtggagtctagctcctgggacggtcgt
tatgccctggcggtggcaggagacattgcagtttacgccacaggaagtgcccggccgaca
gggggcgccggtgcgatagccatgttggtagggcccaacgccccactggcttttgacaga
ggtctgcggggtacacacatgcagcacgcctacgacttctacaagccagacatggcgtca
gaataccctgtggtggacggaaagctgtctatcgagtgctacctcagcgcgttagattgc
tgttactctgtctaccgcaacaagatccatgcacagtggcaaagagagggtgtggacaag
cgtttcagcctggaggactttggctacatggtgttccactctccctactgcaagctggtg
cagaagtccttagcccgtctggtgctcagtgacttcctcagccaccccaggtccaacaca
gagactggaccattcagtggcctggaggctttcagggaggtgaagccggaagagacctac
ttcaacagggatgtggagaaggccttcatgaaggccagcacagagatgtttgatcagaag
accaaggcttccctcctcgtctccaaccagaatggcaacatgtacaccccctctgtctac
ggctgccttgcttctgtcatcgcacaacacacacctcagcacctggcgggccagagaatc
ggcctgttctcctacggctcaggatttgccgccacactctactccctccgagtctcccag
gacgccacgcctggctctggattggataagctctgtgccagcctttgtgacctcaaggcc
agactggactccaggaggaaggtgtcacctgccatgtttgctgaaaacatgcagctgagg
gaagatacccaccacctagcaccgtacgtgccccagggcgctgtggaggagctgtttcct
gggacgtggtatctgacccgggtggacgaaaagcaccgtcgggagtactccagacgctcc
ctgaacgacgacttgcccctggaggctggcctggtcaactccaccacagccactgagcag
cacatcccaagcccagtgaagaagatgccccgcctccccgcctccacagctggtcctgag
gcggtcaccgttagcaatggggatcattaa
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