KEGG   Oncorhynchus gorbuscha (pink salmon): 123993417
Entry
123993417         CDS       T07892                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008  Ribosome biogenesis in eukaryotes
ogo03013  Nucleocytoplasmic transport
ogo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123993417 (ran)
   03008 Ribosome biogenesis in eukaryotes
    123993417 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123993417 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    123993417 (ran)
   03009 Ribosome biogenesis [BR:ogo03009]
    123993417 (ran)
   03016 Transfer RNA biogenesis [BR:ogo03016]
    123993417 (ran)
   03036 Chromosome and associated proteins [BR:ogo03036]
    123993417 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    123993417 (ran)
   04031 GTP-binding proteins [BR:ogo04031]
    123993417 (ran)
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     123993417 (ran)
Ribosome biogenesis [BR:ogo03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    123993417 (ran)
  Pre-60S particles
    123993417 (ran)
Transfer RNA biogenesis [BR:ogo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    123993417 (ran)
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     123993417 (ran)
   Spindle formation proteins
    123993417 (ran)
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123993417 (ran)
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    123993417 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RNA_helicase AAA_24 G-alpha Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin AAA_16 AAA_22 TsaE DUF5906 SRPRB AAA_33
Other DBs
NCBI-GeneID: 123993417
NCBI-ProteinID: XP_046151499
LinkDB
Position
LG13:complement(69218748..69223365)
AA seq 215 aa
MAEGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LAPPEILMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagaaggcgagccacaggtccagttcaagcttgtgttggttggcgatggaggaacg
ggaaagactactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgcc
actctgggagtggaggtgcacccgctggtcttccacactaacagaggggccatcaaatac
aacgtgtgggacacagctgggcaggagaaatttggagggctcagagacggctactacatc
caagcccagtgtgcgatcatcatgtttgacgtcacgtctcgagtcacctacaagaacgta
cccaactggcatcgtgacctggtgcgtgtctgtgagaacattcccatagtcctctgcggc
aacaaggtggacatcaaagaccgtaaagtcaaagccaagagcatcgtattccatcgcaag
aagaacctccagtactatgacatctctgctaagagtaattacaactttgagaagcccttc
ctgtggctagcacggaagctgattggagaccccaacctggagtttgtggccatgcccgcc
ctcgcccccccagagatcctcatggacccctccctcgccgcgcagtacgagcatgacctc
aaagttgcatcagaaacagcgctcccagatgaagatgatgacctttaa

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