Oncorhynchus gorbuscha (pink salmon): 123993883
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Entry
123993883 CDS
T07892
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
123993883 (trpc6b)
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123993883 (trpc6b)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
123993883
NCBI-ProteinID:
XP_046152304
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All DBs
Position
LG13:complement(2128749..2196002)
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AA seq
827 aa
AA seq
DB search
MLRQTLAKTRRLGMRGPAYMFSARSASLSLTEERFLDAAEYGNIPGVRKMLEELPELNVN
CVDYMGQNALQLAVANEHLEVTELLLKKDNLARIGDALLLAISKGYIRIVEAILSHRAFA
DTQRLVDSPGRAETQDDFFSYDEDGTRFSHDITPIILASHCHEYEVVHILLRKDARIERP
HDYLCKCGTCSYHQKHDSFSHSRSRINAYKGLASPAYMSLSSKDPVMAALELSNELAVLA
NIEKEFKKDYKELSVQCEDFVVGLLDLCRNTEEVEAILNGDIDASENNEPHERPSSKRLK
LAIKYELKKFIAHPNCQQQLMSIWYENLSGLRQQTNVVKFLVVLGVAVGLPVLALLYWVA
PTCKLGKIMRGPFLKFVAHAASFTIFLGLLVMNAADRFQGTKLLPNMTVQDHPSQLFRMT
TTPFTWMEILIISWVIGMVWAECKEIWSQGAREYLSETWNLLDFGMLSLFVTSFITRFMA
FWHAYSAQSYVNKHYTDLSNITLVPEIEYYRLARNNWVPSDPQIISEGLYSIAVVLSFSR
IAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMFGMFNLYSYYLGAKQNDAFT
TIEESFKTLFWAIFGLSEVKSVKINNGHKFIENIGYILYGVYNVTMVIVLLNMLIAMINN
SFQEIEDDADVEWKFARAKLWFSYFEEGGTLPVPFNLVPSPKSIIALVLELRDLMLKALN
RHKSCHNEDTELNKLDHHKNSTVGGLACPGRHQKIMKRLIKRYVMKAQINKDSEEVNEGE
LKEIKHDISSLRYELLEQKNHNTEELAELIRRLGEKIPAEQQRHQGI
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgctacgacagaccctggccaagacacggagactgggcatgcgggggccggcctacatg
ttcagcgcccgctcagccagcctatccctgaccgaggagcgcttcctggacgcggcggag
tacggcaacatccccggggtccgcaagatgctggaggaacttcctgaactcaacgtcaac
tgtgtggactacatgggccagaatgcattgcagctggcggtggccaacgagcatctagag
gttacggagctgttactgaagaaggataatctggccaggataggggatgctctactgttg
gcaatcagcaaaggatacattaggatagtggaggccatattgagtcacagggccttcgca
gacacacagaggctcgtcgacagtcctggccgagcagagacacaagacgacttcttctcc
tatgacgaggatggtacacggttttctcacgacatcacccccatcatcctggcctctcac
tgccatgagtacgaggtagtacacatcctcctgaggaaggacgcccgtatcgagcgacca
cacgactacctctgtaagtgtggcacctgcagctaccaccagaagcatgactcgttcagc
cactctcggtcccgtatcaacgcctataaagggctggccagcccggcctacatgtctctc
tctagcaaagaccctgtgatggctgccctggagctgagcaacgagctggctgtcctggct
aacatcgagaaggagtttaagaaagattacaaggaactgtccgtgcaatgtgaagacttt
gtggtcggactgctggacctgtgtcgtaacacggaggaggtggaggccatcttgaatggg
gacattgatgccagtgaaaacaatgagccacatgaaagaccaagttctaaaagactaaag
ctcgcaataaaatatgaactgaagaagttcatagcccatccaaactgtcagcagcagctc
atgtctatctggtacgagaacctgtctggactgagacagcagaccaacgttgtcaagttt
ctggtagttctgggtgtagctgttggactgcctgtcctggctctgctctactgggtggca
ccgacttgcaagctggggaagataatgcgtggtcccttcctgaagttcgtggcccatgca
gcttccttcaccatcttcctgggcctgctggtgatgaatgcagcggatcgcttccagggt
accaaactgctccctaacatgacagtacaggaccacccctctcagctgttcaggatgacg
accacccccttcacctggatggagatactcatcatatcctgggtcataggaatggtatgg
gctgagtgtaaggagatttggtcccagggagctcgggaatatctttcggagacatggaat
cttctagactttggaatgctgagccttttcgtgacatccttcatcactagatttatggca
ttctggcatgcgtattcagcacagagctacgtcaacaagcactataccgacctgtccaac
attaccctggtcccggagatagagtactacagactggcccgtaataactgggttccctcg
gacccccagatcatctcagagggtctgtattccatcgctgtggtactgagcttctctcgc
atcgcctacatcctcccagccaatgagagtttcgggcccctgcagatatctctgggacgc
acggtgaaagatatcttcaagttcatggtgatcttcatcatggtttttgtggccttcatg
tttggaatgttcaatctctactcatactacctcggagccaagcagaacgacgccttcacc
acgattgaggaaagtttcaagacgttattctgggccatttttggcctgtccgaagtcaag
tcagtgaagatcaacaatggccataagtttatcgagaatatcggctatatcctttatggg
gtttataacgtcaccatggtgatcgtcctgctcaacatgctcattgccatgatcaataac
tccttccaggaaatagaggatgacgctgatgtagagtggaaatttgcccgagctaagcta
tggttctcctactttgaggaaggtgggacattacctgtcccctttaacctggttcctagt
cccaagtcaatcatcgccctggtcctggagctaagagacctcatgctgaaggctctcaac
agacacaagagctgtcacaatgaggatacagagctcaataagttggatcatcataagaat
tcaactgttggaggtctggcttgtccaggtcggcaccagaagataatgaaacgcctcatc
aagagatatgtgatgaaagcacagatcaataaagacagtgaggaagtcaatgaaggagag
ctgaaggagattaaacatgacatctctagtttacgctacgaactcctggagcagaagaac
cacaatacggaggagttagctgagctgatccggagactgggagagaagatacctgccgag
cagcagaggcatcagggtatatag
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