Oncorhynchus gorbuscha (pink salmon): 123994181
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Entry
123994181 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04210
Apoptosis
ogo04217
Necroptosis
ogo04510
Focal adhesion
ogo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123994181
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
123994181
04217 Necroptosis
123994181
09144 Cellular community - eukaryotes
04510 Focal adhesion
123994181
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123994181
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123994181
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123994181
03029 Mitochondrial biogenesis [BR:
ogo03029
]
123994181
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123994181
Peptidases and inhibitors [BR:
ogo01002
]
Peptidase inhibitors
Family I32: IAP family
123994181
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123994181
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123994181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
123994181
NCBI-ProteinID:
XP_046152665
LinkDB
All DBs
Position
LG13:88298450..88305228
Genome browser
AA seq
463 aa
AA seq
DB search
MSGPRRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSSERLARAGFYFTGQADKVRCFS
CRKTVENWRGGDAPVERHAEVSPSCKFLSCTHRSRVNSLQGAMLTNETSYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGEGDQVQCFC
CGRMLKGWEAGDTAWGEHSKHYPYCFFILGHDVGNLPSQRGREVEETRPCLGPRVPMQSF
EERLGSFAGIQHHPIDHERLARAGFYNTGAPDHVGCFRCGGGLKGWQQDEDPWEEHAKHY
PGCSFLLAEKGQEFVSSVQLQGPGRNNAASSHLNGCSSRETEVLQSANAQKAVEMGLEPA
LVERTIQERIRRDGTGYSTLETLLQDCFNRDPDSDIENHDEGPLEKLRKLQREKQCKVCM
DRDICIVFIPCGHLVVCKECSEALDKCPICCCAITQKLKTYIS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccaggagagacagtgatctggagtcggaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttctcccctggcccagcaggtgtcatcggag
aggctggcccgcgctgggttctacttcacgggacaggccgacaaggtgcgctgcttcagt
tgccgcaagactgtagagaactggcgtggaggtgacgcacccgtggagaggcacgcggag
gtctcccccagctgtaagttcctgagctgcacccatcgatccagggttaactctcttcaa
ggtgccatgctgaccaatgaaacctcatacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtagacgataccacctaccccatggccccgcacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccgacctaga
gagctggcccaggcggggctcttctatctgggggagggagaccaggtgcagtgcttctgc
tgtggaaggatgctgaagggctgggaggctggggacactgcgtggggagagcactccaaa
cactacccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagagg
gggagggaggtggaggagaccaggccatgcctgggtcctcgggtccccatgcagagcttt
gaggagaggctaggcagctttgcaggaatccagcaccaccctattgaccacgagaggctg
gccagagcaggcttctacaacacaggtgcaccagaccatgtggggtgtttccgctgtggt
ggaggtctgaagggctggcagcaggatgaggatccctgggaggagcacgccaaacactat
cctgggtgcagttttctactggctgagaaaggacaggagttcgtcagcagcgttcagcta
caaggtcctggccggaacaatgctgcttcaagtcacctaaatggatgttcaagtcgtgag
actgaggtgctgcagtcagccaatgcccagaaggcggtggagatgggtctggagcctgcc
ttggtagagcggacaatacaggagaggatacgcagggatgggacaggctactccaccctg
gaaactctgctgcaggactgctttaacagagaccctgacagcgacatagagaaccatgac
gagggtccccttgagaagctacggaagctgcagagggagaaacagtgcaaagtgtgtatg
gacagagacatctgcatcgtcttcattccctgtgggcacctggtcgtctgcaaggagtgt
tccgaggcccttgacaagtgtcccatctgctgttgtgccatcacacaaaagctcaagaca
tacatctcctaa
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