KEGG   Oncorhynchus gorbuscha (pink salmon): 123994384
Entry
123994384         CDS       T07892                                 
Name
(RefSeq) apoptotic protease-activating factor 1-like isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04115  p53 signaling pathway
ogo04210  Apoptosis
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    123994384
   04115 p53 signaling pathway
    123994384
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    123994384
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 NB-ARC Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th CARD Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EIPR1 RMC1_N Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N PEP5_VPS11_N eIF2A Ge1_WD40 Beta-prop_HPS5 WD40_like Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 WD_LRWD1 CARD_2 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SPT8 WDR54 AAA_16 NACHT nSTAND1 AAA_22
Other DBs
NCBI-GeneID: 123994384
NCBI-ProteinID: XP_046152859
LinkDB
Position
LG14:9090693..9150745
AA seq 1266 aa
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRKEQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTHYVQAVLSEG
GVPQRPVVFVSRPALMNRVREKLHRLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSIGQLDRSDLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLKAFDIQCRVLLTTRDRSLADCVSGSKSEVAVESGLEEDQA
LEILALYVNRKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHTKVVRQYQQRYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELCSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSELRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRG
GLYLDWVNKSSLKSLSRLVVQPHQGSIYSACFSHDGTKIASCGSSKTLRVFKSTSGEKLL
EIQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVERGTLMRMFEDEHEEHVNHCQFTNT
RRRLLLATCSNDKFMNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDAYLSTSSSDGTLK
LWEVSSANEWKSIDVADMFPEQREQTEVMVKCSTWSADGRTIICAARNAVFVFDVETAAM
LLEIRTSRLSTVQYCHACPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETKKVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNG
RTGAVMFQSENQESRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRAVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTSPSSETHLLSWSF
DGTIKVWDMSSGERLQDLVCHQGAVLACDVSPDGQLFATTSADKTAKVWSSASWECVRLL
NGHQDCVRSCRFSWDGRRLATGDDNGEIRLWNVKDGTLLKICSRDNKDAMDSLHGGWVTD
LHFSPDNTMLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILY
ILKKVE
NT seq 3801 nt   +upstreamnt  +downstreamnt
atggcgatgatggaggaaggggcacggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggtgtgctgactggg
gacgaggaggacaggatcaggagcaagcccaccaggaaagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaacgccctggtccgt
gagagctacggagacctggccagcctgctccacaacagcctgcccctggtctcccctgag
gctgagaagagcttctcagatggtggcacccactatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctgatgaaccgggtcagg
gagaagctccaccgcttgcagaaggagcccggctgggtcactgtgttcggcatggccggc
tccggcaagtctgtcttggctgcggaggcagtccgagaccacgcactcatcacagagtgt
tttccgggaggagtccactggctgtccataggccagctggaccggtctgatctgctggtt
aggatccagtcactgtgtttccgtctggagcagcagagccaggagaaagacccctcgtcc
tccctccaccggcctcctggctctctggaagaggccaaggagcgactacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
aaggcctttgacatccagtgtcgagtactgctcaccacccgagacagaagcctagccgac
tgtgtcagcggttctaagtctgaggtggcagtggagagtggactggaggaggatcaggcc
ttggagatcctcgccctgtatgtcaacaggaaaccccagagactcccagaacaagcccgc
agcattgtcagagagtgcaaaggctctcccttggtggtgtccctaatcggggccctgctg
cgggagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaag
cgtatccgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaag
gatgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggtg
gaggacgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccatgacctccagctggacttcctggctgagatgaaccgctct
ggtctagaaagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggt
ccccccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtgctctctgatgttctctctggactgggtcaga
actaaagctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgcc
atactggacaaagagaacagcgagttgcggggccacttccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggg
ggactctaccttgactgggtgaacaaaagtagtctgaagagcctgtctcgtctggtggtc
cagccccaccagggatccatctactctgcctgcttctcccacgacggcaccaagatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacgtctggggagaagctgctg
gagatccaggcccacgacgatgaggtgctctgctgcgccttctccccggatgaccgtctc
ctagcaacctgctccagtgataggaaggtcaaggtttggaatgtggagcgtgggactctg
atgaggatgtttgaggacgaacacgaggagcacgtcaaccactgtcagttcaccaacaca
cgccgacgcctcctactggccacctgttccaacgacaagttcatgaacactaagctgtgg
aacatcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcac
tgctgtttctcccctgatgatgcctacctctccacctcttccagcgacggaaccctgaag
ctgtgggaggtgtcctcggctaatgagtggaagtccatagacgtagcggacatgttcccg
gagcagagggagcagacggaggtcatggtgaagtgcagcacctggtcagcagacggcagg
accatcatctgtgctgccaggaacgcagtctttgtgtttgatgtagagacggcggccatg
ttgttggagatccggaccagtcgtctgagcacggtgcagtactgtcacgcttgtcccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
agtaagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcc
cctgacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagact
aaaaaagtccacacctcatcagctgtctgtttgaagagggattctgacgtgctctttaac
aacggtgacattactgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggaccggagcggtgatgttccagtcagagaaccaggagtctcgtatccgctgcactgcg
atctgctcacagacctcagccgtggggctgggacgagaggatgggacgatacaggtgttg
gaggtgccgtcggggacctctctagccactcttcagggtcacaccagggcagttctccac
tgccagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccacctcaccctcctcagagacacatctcctcagctggtccttt
gacggcaccatcaaggtgtgggacatgtctagtggtgaacggctgcaggatctagtgtgt
caccaaggggcggtgctagcctgtgacgtgtcgcctgacggacagctcttcgccaccact
tccgctgacaagactgccaaggtgtggagcagtgcatcgtgggagtgcgtgcgcctgttg
aacggccaccaggactgtgtccgcagctgccgcttctcttgggacggccggcgcctagca
accggcgacgacaacggagagatacggctgtggaacgtgaaggatggtactctactgaag
atctgttcccgtgacaacaaggacgccatggactctctgcacggaggctgggtgaccgac
ctgcacttctccccagacaacactatgctgctgtctacaggaggatacattaagtggtgg
aacgtggagaaaggagaggccctccagaccttctacccgacaggagccaatctgaaaagg
atccacgtgtcacctgacttctccaccttcgtcaccatcgacaatatcggaatcctctac
atcctgaagaaggtggaatga

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