Oncorhynchus gorbuscha (pink salmon): 123994583
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Entry
123994583 CDS
T07892
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123994583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
123994583
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123994583
Intermediate filaments
Intermediate filament-binding proteins
123994583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
YtkA
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
123994583
NCBI-ProteinID:
XP_046153307
LinkDB
All DBs
Position
LG14:17799706..17885419
Genome browser
AA seq
2785 aa
AA seq
DB search
MMSNNTYYEQQQPPQYYQSTDNGDDEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK
CLNKRINDLQKDLTDGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVSVALEFLEREH
IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQN
KVPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGV
PQVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRSKTLHPKKAKAYGPGIDPRGNT
VLKPAEFIVETVEAGLGEVLVYVEDSEGHTEEARVIPNNDKNRTYSVIYLPKVEGLHKVK
VMFAGQDIDRSPFVVSVSKAMGDPNKVQARGPGLEPVGNVANKPTYFDIYTAGAGAGDVG
VIIVDSQGRRDTVEIILENKGDSIFRCTYCPILKGPHVIYVTFAGQQIPRSPFTVHISEA
PPSALPPGSPVQIVPQSICTPPTDKAKRVPPPTPPKPRRPTSNPNMCRASGRGLQPKGVR
VKEVADFKVYTKGAGSGELKVTVKGPKGLEEPVKVRDVGDGVYECDYYPIMTGKYTITIT
WGGQTIPRSPFEVGVSEDVGSQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEG
PSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILLTANDVFPEKV
KSYGPGLEPIGCIVNKPAEFTIDASGAGRGQLKIYAQDAEGFPIDIQITENGDSTFLCVY
IPTKPIKHTIIITWGEVNVPNSPFRVTIGEGSHPENVKVYGPGVEKSGLKANEPTYFTVD
CSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYMPPGPGRYTIMVLFADH
EIPISPFRIKVDPSHDANKVRAEGPGLNKTGVEVGKPTHFTIYTKGAGKAKPEVHFTGAA
KGDAVRDFEIIDNHDYSYTVRYTAVQQGNMSISICHGGDPIPKSPFNITVAPPLDLNKVK
VQGLNNKVDVGKDQEFTVSTHGAGGQGKMDVKITSPSRRPIPCKLESDTANEVHTVKYIP
PEEGPYKVDISYDGNPVPGSPFTVEGVMPPDPSKVRAYGPGLQGGMVGKAAPFAIDTKGA
GTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFAEQHIPGSPFKAMVQ
SVFDPSKVTASGPGLERGKVNEAGSFVVDCSKAGEAELTIEIISDSGSKAEVRVQNNSDG
TYSITYIPQFHGMYTITIKYGGHAVPKFPARVQVDPAVDTSGVKVYGPGVEPRGVLREVT
THFIVDARAKSKTGGSHVKARIVNPTGANTDAYITDKGEGTYRVEYAAYEDGMHLIEVLY
DDVAVPNSPFRVPVTEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGTGGLGLAIEGP
SEAKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGLPIPGSPFRVPVRELVDPSKVRCSG
PGLGSGVRARVLQTFTVDTSKAGLAPLGVMLYGPTGVAEPVNITDNGDGTHTATYTPAKD
GPYTVCVKYADQEVPRSPYKIKTLPAHDASKVRASGPGLNAQGVPASLPVEFTIDARDAG
EGLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMAGRYTITIKYGGDEIPYSPYRIHA
LPTGDASKCLVTVSIGGHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAEL
DVDVVENSDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTVPIIEEPCDKLQL
QQPYQAYQGYPPHWATEEPVTTGDIMEPMLRPFNLVIPFTVQKGEITGEVRMPSGKTARP
NITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHG
MVNKPATFTIVTKDAGEGGLSLAVEGPSKAEINCKDNKDGTCTVSYLPTVPGDYNIIVKF
DNKHIAGSPYTAKITGDDTMRTSQLNVGTATDVSLKISETDLSSLTASIRAPSGNEEPCL
LKRLPNRHIGISFTPKEVGEHVVSVKKNGTHVTNSPFKIMVGQSEIGDASKVKVFGQGLV
EGHIFEVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINI
KFADQHIPGSPFTVKVCGEGRVKESITRKRHAPSIATVGSTCNLNLKIPGNWFQMVSAQE
RHTRTFTRSSHTYTRTECTEISKTRAGETKREVRVEESTQVGGDPFRDVFGEFLGSQSLT
GFSGIPATTRQSQEGVCVTQEGDQGTQEMTAHVTSPGGKTEDAEIIDGEDSTYSVRFIPQ
EMGPHTVNVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGVAAEFSIWTRE
AGAGGLSIAVEGPSKAEITFEDRKDGSCGVAYVVQEPGDYEVSIKFNDEHIPDSPFIVPI
ATLSDNARRLTVTSLQEMGLKVGQEASFAVQLNGARGLIDAKVHTPSGAVEECYVTELDS
DQHAIRFIPRENGVHSIEVRFNGSHIPGSPFKIRVGEIGQVGDPGMVSAFGPGLEGGTTG
VASDFVVNTCNAGSGALSVTIDGPSKVKMDCQDCPEGYKVTYTPMAPGSYLITIKYGGPS
HIVGSPFKAKVTGARLSGGHSLHETSSVLVETVTKSLSSSSSMGVAYGPKFSSDASKVVS
RGAGLSKAFVGQKNTFTVDCSNAGTNMLMVGVHGPKTPCEEVYVKHLGNRMYSVTYTVKE
QGNYILIVKWGDENVPGSPFHVTVP
NT seq
8358 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaataatacttactacgagcagcagcagccgccgcagtactaccagagtacg
gacaacggggacgacgaagaagaggagatgccggctacggagaaggacctcgctgaggat
gcgccctggaagaaaatccaacagaacaccttcaccaggtggtgtaacgagcacctcaag
tgcctcaacaagcggatcaacgacctacagaaagacctgaccgacgggctcaagctcatc
ggtctcctggaggttttgagccagaagaaaatgtacagaaagtaccacgccagacctaac
ttcagacagatgaaactggaaaatgtgtccgtcgcgctggaattcttggagagagaacac
ataaagctggtatcgatagacagtaaggccatcgtggatgggaacctgaagcttatcctg
ggtctgatctggactctgatcctgcactactccatctcaatgcccatgtgggaggacgag
gacgatgaggacgccaagaagctgacccccaagcagaggctgctgggatggatccagaac
aaggtgccccagctgcccatcaacaactttcaccgtgactggagggacggcaaggctctg
ggagccctggttgacaactgtgccccaggcctgtgtcctgactgggagacgtgggatcct
agccagcctgtggagaatgccagggaggcaatgcagcaggctgacgactggctcggtgtg
ccccaggtgatagcccctgaggaaatagtggaccccaatgtggacgagcactcggtgatg
acctacctgtcccagtttcccaaatccaagctgaagcctggcgccccactgcgctccaag
actctgcaccctaagaaggccaaggcctacggaccaggtattgatcccagaggtaacacg
gtgctgaagccggctgagttcatcgtggagacagtggaggcggggctaggggaggtgctg
gtctatgtggaggactcagagggacacacagaggaggccagagtgatccccaacaatgac
aagaacaggacgtactctgtcatctacctacccaaagtggagggccttcacaaggtgaag
gtgatgttcgctgggcaggacatagacaggagtcccttcgtagtgagtgtgtccaaggcc
atgggagaccccaacaaggtgcaggccagaggaccaggactggagcctgtaggcaacgtg
gctaacaagccgacctacttcgacatctacacagcaggtgccggtgctggagacgtgggt
gtgatcattgtggactcccagggcagaagagacaccgtggagatcattctggaaaacaag
ggggacagtattttccgttgtacctattgccctatcctgaaggggcctcatgttatctac
gtgacgtttgctgggcagcagatacccagaagccctttcactgtccacatctcagaggct
ccaccgagcgccctgccccctggctctccggtgcagatagtgcctcagtccatatgcacc
ccacccacagacaaggccaagagagtgccccccccaacaccgcccaaacccaggcgacca
accagcaaccccaacatgtgccgggcctcagggagaggtctgcagcctaagggagtgagg
gtgaaagaggtggccgacttcaaggtctacaccaagggagccggcagcggagagctcaag
gtcactgtcaaggggccaaagggactagaggagcctgtgaaggtgcgtgacgtgggagac
ggggtgtatgagtgtgactactaccccatcatgactggcaaatacaccatcaccatcacc
tggggcggacagaccatcccacgcagcccgtttgaggtgggggtgagtgaggacgtgggg
tcccagaaggtgagggcgtgggggccgggcctggagacaggcatggtggggaagtcagct
gactttgtggtggaggccatcggcacagaggtgggaactctgggtttctccatcgagggc
ccgtcgcaggctaagatagagtgtgatgataagggcgacgggtcatgtgacgtacgttac
tggcccacggagcctggcgactacgctgttcacgtcatctgtgacgacgaggacatcaag
gacagcccctttatggcccacatcctcctcacagccaatgacgtgttccctgagaaggtg
aagagctatggcccaggtctggaaccgattggctgcattgtcaacaaaccagcagagttc
accattgatgcaagtggagccggcaggggccagctgaagatatacgcccaggatgcagag
ggcttccccatcgacatccagatcacagagaacggagacagcaccttcctctgtgtctac
attcccaccaagcccatcaaacacaccatcattatcacctggggagaggtcaacgtcccc
aacagtcccttcagggtgaccattggagagggcagccacccagagaatgtgaaggtgtat
ggtccaggtgtggagaagtcaggcctgaaggccaacgagcccacctacttcactgtggac
tgcagcgaggcaggtcaaggggatgtcagtattggcataaagtgtgctcccggcgtggtg
ggtccggcagaggctgacatcgactttgacatcatcaagaatgacaacgacacgttcacg
gtgaagtacatgccccccggccccggacgctacaccatcatggtgctgttcgctgaccac
gaaatacccatcagccctttcaggatcaaggtggacccctcccatgacgctaacaaggtg
agggcggagggacccggactcaacaagacaggtgtggaggtaggtaagcccacccacttc
accatctacaccaagggagcgggcaaggccaagcctgaagtgcacttcaccggagcagcc
aaaggggacgccgttcgagactttgagatcattgacaaccatgactattcctacaccgtg
cgctacactgcagtgcaacagggtaacatgtctatctcaatctgccacggcggtgacccc
attcccaagagccccttcaacatcactgtggctccgccccttgaccttaacaaggtcaaa
gttcaggggttgaacaacaaggtcgacgttgggaaggatcaggagttcacagtgagcacg
cacggcgccggtggtcagggcaagatggatgtgaagatcacctcgccctctcgtcggcca
atcccctgcaagctggagtctgacacggccaacgaagtgcacactgtgaagtacattccc
cctgaggagggaccctacaaagtggacatcagctatgatgggaaccctgtgcctgggagc
cctttcactgtggagggggtgatgccccctgacccctcaaaggtgcgtgcgtatggccca
ggcctccaggggggcatggtgggcaaggcggcccccttcgccattgacaccaagggtgcg
ggcaccggcgggctgggcctgaccgtggaggggccatgcgaggccaagatcgagtgccag
gacaacggcgatggctcctgctctgtctcctacctgccaacagagcccggcgaatacgcc
atcaacatcctgtttgccgagcagcacatccccggctcccccttcaaggccatggtacag
tctgtgtttgaccccagtaaggtcacagcaagtgggccaggcttggagagagggaaggtc
aacgaggcagggtcgttcgtagtggactgctccaaggctggggaggccgagctgaccatt
gagattatttccgattcggggtcgaaggcggaggtgcgtgttcagaacaacagtgatggg
acctattctatcacgtacatcccacagttccatggcatgtatactatcaccattaaatac
gggggccacgccgtgcccaagttccccgcccgtgtgcaggtggacccagccgtggatacc
agcggggtgaaggtgtacggaccaggagtggaacccagaggggtcctgagggaggtgacc
acccatttcatcgtggatgcccgtgccaagagcaagaccgggggcagccatgtcaaggcc
cgcatcgtcaaccctacaggcgccaacacagacgcctacatcactgacaagggggaaggc
acctacagagtggaatacgctgcctacgaggatgggatgcacctgatagaggtgctgtat
gatgatgtggcggtgcctaacagtccgttccgtgtcccggtaacggagggttgtgacccc
agccgtgtcagagcctacggacctggtctggaggagggcctggtcaacaaacccaaccgc
ttcaccgtggaaaccaggggtgctggtacagggggtctgggtctggccatcgagggtcca
tcagaggctaagatgtcctgtaaggacaataaagatggcagctgcagtgtggagtacatc
cccttcaccccgggagactatgatgtcaacattaccttcggaggcttgcccatcccaggg
agtcccttccgtgtgccagtgagagagctggtggacccaagtaaggtgaggtgttcaggc
ccagggctgggtagtggagtcagagcccgtgttcttcagaccttcactgtggacaccagc
aaggctgggctcgcccctctgggagtgatgctgtacggacctactggagtggctgagcca
gtgaacatcacggataacggagacggaacacacacagcgacctacaccccggccaaggac
ggcccgtacaccgtgtgtgtgaagtacgctgaccaggaggttcctcgcagtccgtataag
atcaagacattgcctgctcatgatgccagtaaggtgcgtgccagtgggccaggtttgaat
gcccaaggtgtgcctgccagcctgcctgtggagttcaccatcgatgcccgtgatgctggc
gaaggcctgctcactgtgcagatactggacccagaaggcaagccgaaaaaggccaacatc
cgtgacaacagagacgggacgtacacagtgtcctatgtaccagacatggcagggcgctac
accatcaccatcaagtacggaggagatgagattccctactcaccctatcgtattcatgcc
ctgcccactggagacgccagcaagtgtctggtcacagtttccattggaggacatggattg
ggttcaggcctcggacccaccatccagatcggcgaggagaccgtcatcaccgtggacgct
aaagctgctggaaaggggaaggtgacctgtaaggtgtcgacgccagacggggccgagcta
gacgtggacgtggtggagaattccgacggaacgtttgacatctactacacggctccggag
cccgggaaatacgtcatcaccatccgctttggaggagaacacattccaaacagccccttc
cacgtggtggccagtgataccgtccctataatagaggaaccgtgtgacaagctccagtta
caacagccctaccaggcctaccagggctacccccctcactgggccacagaggagccagtc
accaccggcgatatcatggagcctatgctccgccccttcaacctggtcattccattcact
gttcagaagggagagatcacaggtgaggtgcgtatgccctcaggtaagacagcccgtcct
aacatcacagacaacaaggatgggacagtaacagtgaaatacgcccctacagagaaaggc
ctgcacgagatggacatcaaatatgatggaaaccacatcccaggaagtcccctccagttc
tatgtagatgccattaacagtggtcatgtgacagcctatggtcctggtctgagtcacggc
atggtcaacaaacctgccaccttcaccatcgtcaccaaggatgcaggggaaggtggtctg
tccctggcagtggagggtccctctaaggcagagatcaactgtaaggacaacaaggatgga
acctgtactgtgtcctaccttcccactgtgccaggagactacaacatcatcgtcaagttt
gacaacaaacacatcgccggcagcccctacactgccaagatcacaggagacgacactatg
aggacatcccagctcaacgttggcacggcaacagacgtgtcattaaagatctcagagaca
gacctgagcagcctgacagcgagcatcagagcaccgtcgggcaacgaggaaccctgcctc
ctcaagagactgcccaatcgacacatcggtatctcattcacccctaaggaggtaggggag
catgttgtgagtgtgaagaagaacgggacgcacgtgaccaacagccccttcaagatcatg
gtgggtcagtcagagatcggtgacgccagcaaggtcaaggtgtttggccagggactggtg
gagggacacatctttgaggtggctgagttcatagttgacaccaggaacgcaggttatggt
ggtctgggcctgtctatagagggtcccagtaaagtggatattaactgtgaggatgtggag
gatggtacctgtaaggtgacctactgtcccactgaaccaggaaattacatcatcaacatc
aagttcgccgaccagcacattccaggaagtcctttcacagtgaaggtgtgtggtgagggc
agggtgaaggagagcatcaccaggaagagacatgctccatccattgctactgtgggcagc
acctgtaacctcaacctcaaaataccaggtaattggttccagatggtgtcggcccaggag
cggcatacgcgcacgttcacgcgcagcagtcacacgtacacgcgaacggagtgcacagag
attagtaagacaagggcgggggagaccaagcgggaggtgcgcgtggaggagagtacccag
gtcgggggagaccctttcagggacgtgtttggagagttcctggggagtcagagtctcaca
ggcttcagtgggataccagccactaccagacagtctcaagagggtgtgtgtgtgacacaa
gagggtgaccaggggacccaggagatgacggcccatgtgaccagtccggggggtaaaacg
gaggacgcagagatcatcgacggcgaggacagcacctacagcgtccgcttcatcccccag
gagatgggtccccacacggtcaacgtcaagtaccggggccagcatgtccccgggagcccc
ttccagttcaccgtggggcccctgggagagggaggggcacacaaggtccgggctgggggc
acggggctggatagaggagtggcaggagtggcagctgagtttagtatctggaccagagag
gctggagcagggggtctgtccatcgctgtagaggggcccagtaaggcagagatcaccttt
gaagacaggaaggatggatcctgtggagtggcctatgtggtgcaggagccaggtgactat
gaggtgtccattaagtttaatgatgagcacatcccagacagtccctttatagtccccatc
gccactctgtctgataacgcacgccgccttacagtcaccagcctacaggagatgggattg
aaggtgggccaggaggcgtcgttcgcggtgcagttgaacggggcgagggggttgatagat
gctaaggttcacaccccgtccggagctgtagaggagtgttatgttactgagctggacagc
gaccagcacgccatccggtttatcccgagggagaacggagtccactccatcgaagtgcgt
ttcaacgggagccacattcccggtagtcccttcaagatccgcgtgggagagatcggacag
gtcggagacccgggaatggtgtctgccttcggacctgggctggaaggaggaaccacaggc
gtggcatcagattttgtagtgaacacgtgtaatgcggggtcgggtgctctgtcagtgacc
attgatgggccgtccaaggtcaagatggactgtcaggattgtcccgagggttacaaggtc
acttacacacccatggcccccggcagctatctcatcaccatcaaatacggaggaccatcg
cacatcgtaggtagccccttcaaggctaaagtcacaggtgctcgtctctctggtggccac
agtctacatgaaacttcgtccgtacttgtggagacagtaaccaagtcgttgtcgtcgtca
tcgtcaatgggcgtggcctatggccctaagttctcttcggatgccagtaaggtggtctcc
cggggcgccggcctatcaaaggcctttgtagggcagaagaacaccttcacagtggactgc
agcaatgcaggaactaacatgttgatggtgggggtacatggacccaagactccgtgtgaa
gaggtctatgttaaacatctgggaaacaggatgtacagcgtcacctacaccgtcaaagaa
cagggcaactacatcctcatcgtcaaatggggggatgaaaatgtccccggcagccccttc
catgtcaccgtcccctaa
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integrated database retrieval system