Oncorhynchus gorbuscha (pink salmon): 123995267
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Entry
123995267 CDS
T07892
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123995267
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123995267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
123995267
NCBI-ProteinID:
XP_046154707
LinkDB
All DBs
Position
LG14:62450054..62571614
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AA seq
2061 aa
AA seq
DB search
MALLVHLKTVRDLRGKGDRIAKVTFRGLSFYTRVLENCEDEARFDEMFRWPIASRVDENE
ILELQVFNYSKIFTNRVIGTFRMVLQKVAEEGQLEVTDTLIDDNNTAMRTSVTVDIKYTT
MDGTVGVWSDGEFLDVPGDPEGTFQFETDSLLSGHSHGSGSGVSPGRSIHGIPTFRKAGK
GVFSAMKLHKTKSSRDDHKKDEPATLDMEDLDRKALRLGGFGGLDPDCISLASVTAVTTN
VSNKRSKPDIKMEPSSGRPVDYQISITVVEARQLVGLNMDPVVCVEIGEDKKYTSMKEST
NCPYYNEYFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTVYSQPEHQF
YHKWAMLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPL
ERQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVVFAGQRGKTSVQKS
SYEPVWNEQVVFTEMFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLQKIANDGDKGFLPTM
GPAWVNMYGSTRHYTLIDEHQDLNEGLGEGVSFRARLLISVAVEILDTTSTEIVSSTEVQ
VEPVSNISESATGKIEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPTA
AKKKKKKEGGGESDEEESELIQQNSSEDEADDDGDLVSVSSTPPMKPVITDRNYFHLPYF
EKKPCIYIKSWWQDLRRRLYNSNIMDKIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEE
LSTGCNRFVTLANKDQNQAGRTKLDKERLKSCMREMESMGQQAKLIRSQVKRNTVRDKLK
MVQNFLHRLRFLADEPQHSIPDAFVWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKV
KAVFLRLPGKKGFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPNGFEENKAPRTSPCLQ
SVPPVSLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCP
TWDQLLVFEDVELFGEAGELRDDPPIIVVEVYDQDTVGKAEFIGRTFAKPITKMCDEHYG
PPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIPYDDEEIRRALIAVHDFAVPQIKIGQGG
RAELPPIDGPTDSERGPILPVPMGIRPILSRYRIEVLFWGLRDLKRVNLALVDRPRVDIE
CAGRGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNVRVVDCRAFGRYTLVGSH
AVTSLRRFIYSPPDKTHNNWASAARLMNGYMVLTNGGSQSRPCSPYSRTPPRTLSRPAGD
VTVNMDADPSVRKMDTVVKLDATSDAVVKVDVNEEKEEKKKKKKKKKGEVEEDDETDESM
LDWWSKYFASIETLMEILRAQEAALAEAEEREDQEIAAEGADIKPDDLPVKGSKGKEKSR
DKNRNKEKKKSHHAGEETEKHSSKPKVDELLVYNKELEAEYDNFEDWLHTFNLYRGKAGD
DDEAALDDDRIVGRFKGSMCMYKLPLSEEITREVGFDPNMGMFQSIPHNDPINVLVRVFV
VRATDLHPADVNGKVDPYVVIKLGKSELKDKENYISKQLNPVFGKAFDMEATFPMESMLT
VSVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIANNYSVHGYNVWRDPMKPSQILAK
LCKEGKLDGPHYGPGGRVKVANRVFMGATEIEDENGLKKQTDEHLALTVLKHWEEIPRVG
CKLIPEHVETRPLLNPDHPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKNFELRVII
WNTDDVVLEDDAFMTGEKMSDIYVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVYPFD
YLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGA
KTAKQCSINMVQNQAELPCISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLMSAEE
AEKSPVGLGRNEPDPLEKPNRPNTSLSWILSPVRVVCILVWRQYKLHCALLLGAILGLLF
LGLLFFSLPSALSYKIFNVAG
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggctcttttagtccacctaaaaacagtccgggaccttcgcggaaagggggacagaatc
gccaaagtcacatttcgaggtctgtcgttctacacacgtgttctggagaactgtgaggat
gaggccagatttgatgagatgttccgatggccgatcgccagtagagtggatgaaaacgag
atactggagcttcaagtgttcaactacagcaaaatcttcaccaacagagtcattggaacc
ttccggatggttctacagaaggtggcggaggaggggcagctggaggtgacagacacactc
atcgatgacaacaacaccgccatgcggactagtgttaccgtagacatcaagtacacgacc
atggatgggacagtgggggtgtggagcgatggggaattcctggacgttccgggcgaccca
gagggaacgttccagtttgagacagacagcctgctttccggacacagccatggatcagga
tcaggagtgtctcctggacgatccatccacggaattcccactttcaggaaagcagggaaa
ggggtattctcagccatgaagctccacaagaccaagagctccagagatgaccacaagaaa
gatgagccagccaccctggacatggaggatctggacaggaaggccttgcgtctgggaggg
tttgggggtctggacccagactgcatctccctggcgtccgtcactgccgtcaccaccaat
gtctccaacaagaggtcaaagcctgatatcaagatggaacctagttctgggaggcctgtg
gattaccagattagcatcacagtggtcgaggccaggcagctggtaggcctaaacatggac
cctgtggtctgtgtggagattggggaagacaagaagtacacctccatgaaggaatccacc
aactgcccctattacaatgagtattttgtctttgacttccacgtcccaccagatgtcatg
tttgacaagatcctcaagctctcagtgatccactccaagaacctgctgcggagtggcacc
ttggttggcaccttcaagctagatgttggcacagtctactcccagcctgagcaccagttc
taccacaagtgggccatgctgtctgaccctgatgacatcacagcggggtgcaaaggttac
atcaagtgtgacatcgccgtggtggggaagggggacaatatcaagactccccacaaagcc
aatgagacggatgaagacgacatagaggggaacctcctgcttccagagggagttccgttg
gagaggcagtgggcgcggttctatgtgaagatctaccgagctgagggccttcccaagatg
aacaccagcatcatggccaatgtgaagaaggccttcataggggagaacagagacctggtg
gacccctacgtacaagtggtcttcgctggacagagagggaagacttctgtccagaagagc
agttatgagcccgtctggaacgagcaggtggtcttcactgagatgtttcctccgctctgc
aaacgcatcaaggtccagatacgagactctgacaaagtcaatgacgttgccataggaaca
cacttcattgacctgcaaaagatcgccaacgatggtgacaaagggttcctccccaccatg
ggcccagcctgggtcaacatgtatggctcaacccgccactacactctgattgatgagcac
caggacctgaatgaggggctgggggaaggtgtgtccttcagggcccgcctcctcatctct
gttgccgtagagatcctggacaccacctccactgagattgtgagctccaccgaggtgcag
gtagagcctgtctccaacatctcagagagtgccacagggaaaatagaggaattcttcctg
tttggttccttcctggaggccaccatgattgacaggaagatcggcgataagccaatcagt
ttcgaggtcacaataggtaactacggcaaccagatagacggagtgagcaagcccaccgca
gctaagaagaagaagaagaaagagggaggaggagagagtgatgaggaagagtcagagctg
attcagcagaactccagtgaggacgaggcggatgatgatggggacctggtgtctgtgtcc
tccacccctcccatgaagcctgtcatcacagacaggaactactttcacctgccctacttt
gagaagaagccgtgtatctacatcaagagctggtggcaggacctgaggagaagactctac
aactcaaacatcatggacaagatcgctgacaaactggaggagggtctgaatgacgtgcag
gaggtcattaagacagagaaggcctatccagagcgcagactccgaggagtgctggaggaa
ctcagcactggctgcaatcgtttcgtcactttggccaacaaggaccagaaccaggcaggc
agaactaaactggacaaagagagactcaagtcctgcatgagagaaatggagagcatgggg
cagcaggccaagctgattcgctcccaggtgaagaggaacacagttagagacaaactgaag
atggttcaaaacttcctgcacaggctccgtttccttgccgacgagccccagcacagtatc
ccagacgcgtttgtatggatgatgagtaacaacaagcgtatcgcctacgcccgcatcccc
tccaaagacatcctctactccatcgtagacgaggagacaggcaaggactgtggcaaggtc
aaagctgtcttcctcaggctgcctggtaagaaggggtttggtccagcgggttggacagtg
caggctaagatggagatatacctgtggctgggtctcaacaaacagaggaaggacttcctg
tctggcctacccaacggctttgaagagaacaaggctcccaggacaagcccctgtctacag
tctgtaccccccgtcagtctggtttacaacatgaagcaggtattccagctaagggctcac
atgtaccaggccaggagtctgtttgctgccgacagcagtggcttgtcagacccctttgcc
agggtattcttctccacacatagccaggtcactgaggtcctaagtgagactctgtgccct
acgtgggatcagctgctggtgtttgaggatgttgagctgttcggagaggccggcgagcta
cgagacgacccacctatcattgtggtagaggtctacgaccaggacactgtgggcaaggca
gagttcattggtcggacatttgctaagcccatcactaagatgtgtgacgagcactacggc
cctccgaggttcccccctcagctagagtactaccagatctatcgtggtaactctaccgcc
ggtgacctactggctgcctttgagctgctgcagattccctatgacgatgaggagatcagg
agggctctgattgctgtccatgactttgctgttcctcagattaagattggacaaggggga
agggcagagcttcctcccatcgatggtccgacagactcagaacgtggacccatcctccct
gtacccatgggcatccgacctatcctcagccgctaccgcatagaggttctgttctggggc
ctgagggacctgaagagggtgaatttggccctggtggacagacccagggtggacatagag
tgtgcagggagaggagtccagtctgctctcattcagaactacaagaagaaccccaacttc
agcaccctcgtcaagtggtttgaggtggacctgccagagaatgagctccttcaccctcct
ctgaacgtccgggtggtggactgcagagcgtttggccgctacaccctggtgggttcccat
gccgtcaccagcctgcgacgcttcatttacagccccccagacaagacacacaacaactgg
gccagcgcagctagactgatgaatggctacatggtcctgaccaacggggggtcccaatct
cgcccctgctccccttactcccgcaccccaccccgcaccctctctcgccccgcaggtgat
gtcacagtcaacatggatgccgacccctcagtcaggaagatggacacggtggtcaagtta
gacgctacgtctgatgcagttgttaaagttgatgtgaacgaggagaaagaagaaaagaag
aagaagaagaagaagaagaagggagaggtggaggaggacgatgagacagacgagagcatg
ctggactggtggtccaaatattttgcttccatagagacactgatggagatcctcagggct
caggaggcagctctggctgaggcagaggagagggaggaccaggagatagcagcagaggga
gcagatatcaaacctgatgacctccctgtaaaaggctccaaggggaaggagaagagccga
gacaagaacaggaacaaggagaagaagaagagccaccatgcaggagaggagacagagaaa
cactccagcaaacccaaagtggacgagctgctggtgtacaacaaggagctggaggcagag
tatgataactttgaggactggctccacaccttcaacctgtacagagggaaggcaggggac
gacgatgaagcagccctggatgacgacagaatcgtgggcagattcaagggctccatgtgc
atgtacaagttgcctctgtctgaggagatcacccgggaggtgggctttgacccaaacatg
ggcatgttccagagcattccacacaatgaccctatcaacgtgctcgtgcgcgtcttcgtg
gtcagggccacagacctccaccctgctgatgtgaatgggaaagtggacccctatgttgtc
atcaaactgggcaagtcagagctgaaggataaagagaactatatctccaaacagctcaac
cctgtctttggcaaggcgtttgacatggaggctacgttccccatggagtccatgttgaca
gtgtcagtgtatgactgggatctggtgggcactgatgacctcatcggggagaccaagatc
gacctggagaaccgcttctacagtaaacacagagctacctgtggcatcgctaacaactac
tctgtacatggttacaatgtgtggcgtgacccgatgaagccaagtcagatcctggccaag
ctgtgtaaggagggcaagctggacggcccccactacggtcccgggggcagggtcaaggtc
gccaaccgcgtcttcatgggtgccacagagattgaggatgaaaatggtctgaagaagcag
acagacgagcacctggccctgacggtgctgaagcactgggaggagatccccagggtgggc
tgtaaactcatcccagaacacgtggagacaagacccctactcaaccctgaccaccctggc
attgagcaggggcggattgagatgtgggtagacatgttccccatggacatgccagcacct
ggacccgccatcgacatatcaccacgtaaaccaaagaactttgaactgcgtgttattatt
tggaacactgatgacgtagttctagaggacgatgctttcatgacaggagaaaagatgtct
gacatttatgtcaggggctggctgaagggtcaacaggaggacaagcaggacacagacgtc
cactaccactctctgacgggcgaggggaatttcaactggcgcttcgtgtaccccttcgac
tacctgatggctgaggagaagatcgtcatctccaaaaaggaatccatgttttcctgggac
gagaccgagtacaagatccctgcacgcctcaccctgcaggtctgggatgctgaccacttc
tccgctgatgactttctaggtgcgatagaactggacctgaacaggtttccccgcggggcg
aagacagccaagcagtgttctatcaacatggtccagaaccaggcagagctgccctgcatc
tccatcttcaaacagaagagagtcaagggctggtggccattcgtggcccgtgacgagaac
gacgagatggaactcacgggtaaagtggaggcggagcttcatctcatgtcggcagaggag
gcggagaaaagtcctgttggtcttggacgcaatgagcctgaccctctggagaaaccaaat
cgtcccaacaccagtctgtcgtggattctgagcccggtgcgtgtagtgtgtatcctagtc
tggaggcagtacaagctgcactgtgctctgctgctgggggccatcctgggacttctgttc
ctgggcctgctcttcttctccctgccttctgccctcagctacaagatcttcaacgtcgct
ggctga
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