Oncorhynchus gorbuscha (pink salmon): 123995408 Help Entry 123995408         CDS       T07892                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo04115   p53 signaling pathway ogo04145   Phagosome ogo04148   Efferocytosis ogo04350   TGF-beta signaling pathway ogo04510   Focal adhesion ogo04512   ECM-receptor interaction ogo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ogo00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     123995408   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     123995408  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     123995408    04148 Efferocytosis     123995408   09143 Cell growth and death    04115 p53 signaling pathway     123995408   09144 Cellular community - eukaryotes    04510 Focal adhesion     123995408   09142 Cell motility    04820 Cytoskeleton in muscle cells     123995408  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ogo04131]     123995408   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ogo00536]     123995408 Membrane trafficking [BR:ogo04131]  Endocytosis   Phagocytosis    Opsonins     123995408 Glycosaminoglycan binding proteins [BR:ogo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    123995408 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C TSP1_ADAMTS EGF_3 Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  123995408 NCBI-ProteinID:  XP_046154946 LinkDB All DBs Position LG14:75813233..75832016 Genome browser AA seq 1174 aa AA seqDB search MKLTGIFLMLMLLTCESVRVAENRDDNSVYDLFELVQVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPATARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSVLTDEI VLIDDTINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKFLMNRVGIHSGVCLHNGIVHKNKDEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTLSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTETCTKSPCPINGNWGPWSLWDTCSATCGGGAQTRKRLCNDPAPKYGGKECQGDSKAT QQCNKNACPIDGCLSNPCFPGTKCTSFPDGTWRCGKCPSAYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPARYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHECN KNARCNYLGQFADPMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIADDRDNCPFVYNPRQYDYDRDDIGDRCDNCP YNSNPDQTDTDSNGEGDACSVDIDGDGILNEKDNCPYVYNVDQKDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVKTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRGKEQ NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgatgttgatgcttttgacctgcgagagcgtacgagtt gcagagaaccgagacgacaatagcgtgtacgacctgttcgagctggtccaagtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgagctccccgagagctccttcagggacctcatcgattcc atccatgccgagaggggcttcctcctcctgcttaacttcaagcagtttaagcggaccagg ggctccctcttgaccgtggagaagcgggacggatcaggagccgtgttcgagatcgtctcc aacgggaaagcgaacaccctggatgtggttttctccacggttaacaagcaacaggtggtg tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacggcggaactggacgcg cccattcagagcatcctcactcaggagactcccgccacagcgcgcctcaggatcgggaag ggagcggtgaaagaccggttcatgggggtgctccaaaacgtgcgctttgtctttggaacc actttggacgcgattctgcgcaacaagggatgtcaaaactctgttctgacggatgagatc gtccttatcgacgataccatcaatgggtccagccctgccattaggacggactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgtgaggacttggctggcatg ttcaaggaactgaaggggttgggagtggtggtgaaggagctgtctaacgagctgcgcaaa gtgacggacgagaacaagtttttgatgaacagagttgggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggacgagtggaccgtcgacgactgtaccgagtgc acttgccaaaactctgccaccgtgtgccgtaagatctcctgccccctgatcccgtgtgcc aacgcaactgtgcccgatggagagtgctgcccgcgctgtggaacactgagtgactatgcg gaggatggatggtccctgtggtctgaatggacccactgttccgtgtcttgtgggcgggga attcagcagagaggccgctcctgcgaccgcatcaacaacaactgcgagggaacctcggtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcatcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgcctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagaggga agacagactgagacgtgcaccaagtcaccctgcccaatcaacggtaactggggaccctgg tcgctatgggatacctgctctgccacctgtgggggaggagctcagacacgtaaacgtctc tgcaacgaccccgcccctaaatatggtggtaaggagtgccagggtgactccaaggccact cagcagtgcaacaagaacgcctgtcccatcgatggctgtctgtccaacccttgcttccct gggaccaagtgcaccagcttccctgatggaacatggaggtgtggaaaatgtccctctgct tactctggtgacggcatcaagtgcaaggacattgacgagtgcaaagaggttcctgacgct tgcttcgtgttcaatggagtccaccgctgtgagaacactgaccctggttacaactgtctg ccctgtcccgcacgctactctggacctcagcccttcggcaggggagtggaggaggccacc gccaagaaacaggtgtgtacaccacgtaacccctgcctggatgggagccatgaatgcaac aagaatgcccgctgtaactacctgggacaatttgccgaccccatgtaccgctgtgagtgt aagcctggctatgctggaaatggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaagaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcttgt gacaacgatgatgacaatgatggtattgctgacgacagggataactgtccgttcgtgtac aaccccaggcaatatgactatgacagagatgatattggagatcgttgtgataactgtcct tacaacagcaaccctgaccagacggacacagacagcaacggggaaggagacgcctgctct gtggacattgatggagatggcattctgaatgagaaagacaactgcccgtacgtctacaac gtggaccagaaagacactgacctggacggtgtgggagacatgtgtgacaactgtcctctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagataagtgtgacagc aaccaggacatcgatgaagatggccaccagaataacctggacaactgcccctacatcccc aacgctaaccaggccgaccatgacaaagacggcaagggagacgcctgcgaccacgatgac gacaacgacgggatcccagacgagaaagataactgcagactggccttcaaccctgaccag atcgactccgatggtgatggtcgaggagacgcttgcaaagatgactttgaccaagacaac gtccctgacatctacgacgtgtgtccggagaactttgacatcagcgagacggacttcagg aagttccagatggttcctctggaccccaagggaacgtcccagattgaccccaactgggtg gtcagacatcagggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggtaccttcttcatcaacacagagcga gatgatgactacgccggctttgtgttcggctaccagtccagctccaggttctacgtggtg atgtggaagcagatcacacagacctactggaacaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaactccactactggacctggagagcacctcaggaac gctctctggcacactggtaacaccccaggacaggtgaagactctttggcacgaccctaag aacattggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatggctgattccgggagcata tatgacaagacctacgcaggcggaagactaggcctctttgtcttctcgcaagagatggta tacttctcagacctcaagtatgaatgcagaggtaaggaacaatga

DBGET integrated database retrieval system