Oncorhynchus gorbuscha (pink salmon): 123996746
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Entry
123996746 CDS
T07892
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
ogo04520
Adherens junction
ogo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123996746
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123996746
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
123996746
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
123996746
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123996746
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
123996746
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
123996746
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Type II RPTP family
123996746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
Y_phosphatase3
C2-set_2
Fn3_PTPRU
PTPlike_phytase
Ig_C17orf99
PTP-NADK
SusE
Fn3_ELFN
DUF3465
Motif
Other DBs
NCBI-GeneID:
123996746
NCBI-ProteinID:
XP_046156346
LinkDB
All DBs
Position
LG15:complement(21780746..22235495)
Genome browser
AA seq
1932 aa
AA seq
DB search
MALSHRWAQSPLARGATFILVLGSLALPSPSHADSMPNFIKSPDDQTGISGGVASFVCQA
VGDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEI
NTSAKLTVLEEDQIPHGFPTIDMGPQLKVVEKTRTATMLCAASGNPDPEISWFKDFLPVD
INSSNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQRE
VRRVPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMMGVEELTKEEEMPIGRNVLE
VTNILQSANYSCVAISSLGMIETTAQITVKALPKPPTSLIVTETTATSVTLTWDSGNPEP
VSYYVIQYRAKVSDNSFQEVDGVATTRYSIGGLSPYSEYEFRVMALNNIGRGPPSSLVDT
RTSEQAPSSPPLAVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLRAPLSGWQKHN
TDDSRLTTISGLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFNAEAELDT
RIMLSWLWPVQDQITKYELMYWEANSGNKLHVTFLPAGSYAVEGLKPDTLYMFSLAARSE
MGLGVYTQPIEARTAQSTPSAPPQEVHLLSLSSTSIKVSWVAPPAASRHGDIVRYSLAYQ
AATGEDLERHKVSGIRADVSSYILEGLEKWTEYQVWVRAHTDVGPGPESPTVRIRTKEDV
PGAPPRKVEADVLNSTALRVTWKPPLQVKQHGQIRGYQVVYSRLENGEPRGQPSIMDVSL
PEAQWNVEDTMDYEAVITGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGRPTMM
ISTTIGNTALIQWQPPKEMVGEHVGYQLQYKRMEEESFTVKDFKKTDDHFTVTGLHKGAT
YVFKLCAKNRAGTGEEYVKEITTPDDVPSSYPQNLSVVGLTTTTTKLAWDPPALAERNGR
IVQYVVVYRDINSQQNHTNSTIETQMTIMGLQPDTTYDIRVRAFTSKGAGPNSPSIQSRT
MSTSMPEFTKNFGVKTVMKTSVLLTWEVPETYKSQVPFKILYNQQSVEVQGNLKRKLITR
LQPDTDYSFVLMSRGNSAGGLQQQVSIRTAPDLLKTKPIQYQHHPEEGGKLTITLPRVPT
TAPIRWYYIVVVPVTPATLRRWENPEDMDLDELLEASSDQSLRRRRQTQEFFRPYIAAKM
DNLPDTFTLGDEKKYNGFYNKPLPGQQQYLCFVLAALKDHESQKTFAASPYSDPITVKLH
SGMPLHAEDPEMLWVMGPVLAVVLIIIIVIAILLFKSKKERKRASPSAKDEHSAGVKDSL
LAHSSDPVEMRRLNYQTQGSSDPSCPNTPRMREHPLISTTDLANHIERLKANDGLRFSQE
YESVDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILASVDGVPGSDYINANYIDSYR
KQNACIATQGPLPETLSDFWRMVWEQRTNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMI
QVTMLDTVELATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPTLAFLRRVKS
CNPTDAGPMVVHCSAGVGRTGCFIVIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTED
QYVFIHEALLEAATCGNTEVPARNLYAHIQKLTQVTPGDTVTAMELEFKKLANSKAHTSR
FISANLPCNKFKNRLVNIMPFESTRVSLQPIRGVEGSDYINASFIDGYRQQKAYMATQGP
LAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMP
QYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPI
SAHCSAGVGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAA
LEYLGSFDHYAT
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagccaccgatgggcacaatctcccctcgcgaggggggccacatttatccta
gtactgggcagtctggccctgccatcaccatcccacgcagacagcatgcccaatttcatc
aaatctccagatgaccagacaggtatttcgggaggagtggcatccttcgtttgccaggcg
gtgggcgatcccaagccacgcatcacctggatgaagaagggcaagaaagtcagttctcag
cgctttgaggtgatagagtttgatgacggttcagggtctgtcctgcgtatccagcccttg
cggacccacagggacgaggccatctatgagtgtactgccaccaacagtgtgggagagatc
aacaccagcgccaaactcaccgtcctggaagaggaccagatccctcatgggttccccacc
atagacatgggtccccagctgaaggtggtggagaagaccaggacagcaaccatgctgtgt
gctgccagtggcaaccctgacccagagatctcctggttcaaagacttcctccctgtagat
atcaacagcagcaacgggcgaatcaaacagctccgctcaggtggtacaccaatcagagga
gctctccagatagagaacagtgaagagtccgaccagggcaagtacgagtgtgtggcggtc
aacagtgccgggacccgctactcggctccggctaatctctacgtgagagatcaacgagaa
gtgcgccgggtgccaccccggttctccatcccgcccaccaaccatgaggtaatgccgggt
ggcagcgtgaacctgacgtgtgtggcagtgggagcacccatgccctacgtcaagtggatg
atgggagtagaagagctgaccaaggaggaagagatgcccattggaaggaacgttttggag
gttaccaacatcctccagtctgccaactacagctgtgtggcgatatcgtcactcggcatg
atcgagaccaccgcgcagatcactgtcaaagccttgcccaagccccccacctccctgatc
gtgacggagaccacagccaccagcgtcaccctgacctgggactcggggaaccctgagccc
gtgtcctactatgtcatccagtaccgggccaaggtctctgacaacagcttccaggaggtg
gatggggtagccaccacgcgctacagcattggtggcctcagcccctactccgagtacgag
ttccgcgtcatggcgctgaacaacatcgggcgtggccctcctagcagcctcgtggacacc
aggaccagtgagcaggctccatcctctccaccgctagctgtacaggctcgcatgctcagc
gcctccaccatgctggtccaatgggagccgcctgaggagcctaatggacagatcagaggg
taccgggtgtactacagctcggacctcagagccccactgagtggctggcagaaacacaac
actgacgacagcagactgaccaccatctcagggctgaccactgatatcacctacagcctc
agggtgctggggttcacctctgtaggggacggacctccctctgatgtactgcaggtcaag
acccagcagggagtaccagcccagccatctagtttcaacgccgaggcagagttggacacc
cgcatcatgctgtcgtggctgtggcctgtccaggaccagatcaccaagtatgagctgatg
tattgggaggctaactctggcaacaagctccatgtgaccttccttccagcggggtcctat
gctgtggagggtctgaagccagacaccctctacatgttctccctggctgctcgttctgaa
atgggcctgggcgtctatacccaacccatcgaggccaggactgcccagtccaccccctca
gccccgccccaggaggtgcaccttctgagcctcagctccaccagcatcaaggtgagttgg
gtggcaccccctgcagccagccgccatggggacatcgtccgctactctctggcctaccag
gccgccaccggtgaggacctggagcgccacaaagtgtcgggcatcagggcagatgtttct
agttatatcctggagggcctggagaagtggacagagtaccaggtgtgggtcagggctcac
acggacgtaggcccaggcccagagagccccacggtcaggatcaggaccaaggaggatgtg
cctggagctccacccagaaaggtggaggctgatgtcctgaactccacagccctgagggtg
acgtggaagccccccctccaggtgaagcagcatggccagatcagagggtaccaggtggtc
tactcgcgactggagaacggagagccacgaggccagcccagcatcatggatgtctcccta
cctgaggcacagtggaacgttgaggataccatggactatgaggctgttataacaggcctg
ctccctgagaccacctactctgtcaccgtggcagcctacaccaccaagggggacggggca
cgcagtaaggccaaggtggtcaccaccactggagcagtcccaggcaggcccactatgatg
atcagtaccaccattggtaacacagccctcatccagtggcaaccaccgaaggagatggtg
ggagagcatgttggctaccagcttcagtacaaacgtatggaggaggagtcgttcactgta
aaggacttcaagaagacagacgaccacttcactgtcaccggcctgcacaagggcgccacg
tacgtcttcaagctctgcgccaagaaccgggcgggcaccggcgaggagtacgtgaaggag
attacgacgccggacgatgtgcccagcagttacccccagaacctgagtgtcgtaggcctg
accacgactactaccaagctggcctgggatcctccggcgctggctgagaggaacgggagg
atcgtccagtacgtggtggtgtacagagatatcaacagccaacagaaccacaccaatagc
acgatagagacccagatgaccatcatggggctgcagcctgataccacctatgacatcagg
gtcagggctttcaccagcaagggagccggacccaacagtcctagtattcagagtaggacc
atgtctacctccatgcctgagtttaccaaaaactttggtgtgaaaactgtgatgaagaca
tctgtcctgctgacttgggaagtgccagaaacctacaagtctcaagtgcctttcaagatc
ctgtataaccagcagagtgtggaggtgcaggggaacctgaagaggaagctgatcacgagg
ctgcagccagacacagactacagctttgtgttgatgtctagagggaacagtgctgggggt
ctacaacagcaggtctccatcagaactgccccggacctgctcaagaccaaacccatccaa
taccaacaccacccagaggaggggggcaagctcaccatcaccctacccagagtccccacc
accgcccctatcagatggtactacatagtggtggttcctgtcacaccagccacactacgt
aggtgggagaaccctgaagatatggacctggatgagctcctggaggctagttctgaccag
agcctgagaaggaggagacagacccaagagttcttcagaccctacatcgctgccaagatg
gacaatctgccagacaccttcactctaggagacgagaagaagtacaacggcttctacaac
aagcctctaccaggacagcagcagtacctctgtttcgtcctggctgccctcaaagaccac
gagtctcagaagacgtttgcggccagcccatactcagaccccatcacggtgaagctccac
agcggtatgcccctccatgctgaggacccagagatgctgtgggtcatgggccctgtcctg
gctgttgtactcatcatcatcatcgtcatcgccatcctgctcttcaagagcaaaaaagaa
aggaaacgagcatctccctcggccaaggatgagcactctgctggggtgaaggactctctg
ctggcccactcctctgatcctgtggaaatgagacgactcaactatcagacacaaggttcc
agtgaccccagttgcccgaacactccaaggatgagggagcaccctctcatctccaccact
gatcttgctaaccacatcgagcgtctcaaggccaacgatggactccgcttctcacaggag
tatgagtctgtagaccctggccagcagttcacatgggaacactctaacctggaggtgaac
aagccaaagaaccgctatgcaaacgtcatcgcctacgaccactccagggtcatcctcgcc
tctgtcgacggagtaccaggtagtgactacatcaacgctaactacatagacagctacagg
aagcagaacgcctgcatcgctacacagggcccgcttcctgaaaccctgagtgacttctgg
aggatggtgtgggagcagaggaccaacactatcgtcatgatgaccagactggaggagaag
tcacgggtgaagtgtgaccagtactggcccagtcggggtacagagacttatgggatgatc
caggtgaccatgttggacactgtggagctggctacctacagcgtacgcaccttcgccctc
tataagaatggctccagtgagaagagagaggttcgccagttccagttcatggcctggccg
gaccatggagtgcctgagtaccccacccccaccctggccttcctccgcagggtcaagtcc
tgcaaccccacagatgcaggacccatggtggtgcactgcagtgctggtgtaggtcggacc
ggttgcttcatcgtgattgaggccatgctggagcgtatgaagcatgagaagtcagtggat
atctacggtcatgtgacgtgtatgagagctcagaggaactacatggtgcagacggaggac
cagtatgtctttatccacgaggccctgctagaggcagccacctgcggtaacacagaggtc
cctgcacgcaacctgtacgcacacatccagaaactcacccaggtcacgcccggagacacg
gtcactgccatggagctagagtttaagaaactggccaactccaaagcacatacctcaaga
ttcatcagtgccaacctgccctgtaacaagttcaagaaccggctggtgaacatcatgcct
tttgagtccacccgcgtgagtctgcagcctatcagaggagtggagggctccgactacatc
aatgccagcttcatcgacggatacaggcagcagaaggcctacatggccacccaggggccg
ctagcagagaccacagaggacttctggaggatgctgtgggaacacaactctaccatcgta
gtcatgcttactaaactcagagagatgggaagagaaaagtgtcatcagtactggccagct
gagcgttctgccaggtaccagtactttgtagtggaccccatggctgagtacaacatgccc
cagtacatcctcagagagttcaaggtgacagacgccagggatggccagtctaggaccatt
cggcagttccagttcactgattggccagaacaaggggtgccaaaaactggagagggcttc
attgacttcattggtcaagtgcataaaaccaaggagcagtttggccaggatggaccaatc
tctgcacactgcagcgctggtgttgggcgaactggtgtgttcatcaccctgagtatcgtg
ctggagaggatgaggtacgagggggtggtggatctcttccagactgtcaagacactgagg
acccagagacctgccatggtgcagacagaggaccagtaccagttgtgctacagggcagct
ctagagtaccttggaagctttgaccactatgcaacataa
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integrated database retrieval system
