Oncorhynchus gorbuscha (pink salmon): 123999393
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Entry
123999393 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123999393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123999393
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123999393
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123999393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
Motif
Other DBs
NCBI-GeneID:
123999393
NCBI-ProteinID:
XP_046161110
LinkDB
All DBs
Position
LG16:complement(59141103..59175537)
Genome browser
AA seq
978 aa
AA seq
DB search
MRRYWIEISPNFLHLKKTELAEMDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFS
CIRRWLTEQRAQCPHCRAPLQLRELVNCRWVEEVTQQLDTLQLCNLSKHEENDKDKCENH
HEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELI
SLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLLTLMGQKTSLTQETELL
ESLLQEVEHQLRSCSKSELISKSPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDS
STFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPET
SKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLV
LRYQVRSPTFFQKCRDQYWYISQLESAQSSYIQQINNLKERLAIELICRQQSRSSSPPNR
RLGPSTSERDSRSGKGPVAEGSCQTTDTKEEEEEEEEEKTQHDDSNELSDGDLEVDCLTG
DEVNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEFSRNLDMEEGELPAAVAGAAGS
SNPGARSLRHSGGLSSAGSNNSLLEIDPVILIQLLDLKERSSVESLWGLQPRPPASLLHS
PVQVHSRKERGERRPQTVRRGAPDSGVLIRLKAQMAEVRSKMTDVKCQLEARGETKAGPS
GGATGVEQGPSYHSELGPSRKPIELDLMGKGPGVSRHCRSGVKKASSPKQDGSRLGLRRA
ADVVEKELRGQSGGESSSDQSLFPRGTSNGSEGALKPRSTHSSPPYLGSSSSCSENKPCS
SKHDQEQLYGSDMYALEVLSCISTATMARPRTKTMGAGLLTDSSLDCDSEPAEIRQSLLF
LAEEPSSCPNEGHVVQKRTVVLLPGMSSDSEIDCDTENEDEVVVLEAGDCRYDTPALPCA
GDQLISDLSFTTVETTDR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtattggattgagatttcacccaatttcctccacttgaagaaaactgaactg
gctgagatggatgaacaaagtgttgagagtattgcagaggtgtttcgttgtttcatctgt
atggagaagctgcgggacgctcggctctgcccccactgctccaaactctgctgtttcagc
tgcataaggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactg
cagctgcgggagctggtgaactgccgttgggttgaggaagttacccagcagctggacacc
ctacagctctgcaacctctccaaacatgaggagaacgacaaggacaagtgtgagaaccac
catgagaagctcagtgtgttctgctggacctgtaagaagtgcatctgccaccagtgtgct
ctgtggggaggcatgcatggtggccacaccttcaagcctctggctgagatctatgagcag
catgtgaccaaggtgaacgaggaggtggcaaagctccgccgacgtctcatggaacttatc
agcctggtgcaggaagtggagaggaatgtggaagcagtgcgaggggccaaggacgagcga
gtgcgagagatccgtaatgcagtggaaatgatgatcgcccgtctggacaaccagctcaaa
aacaaactcctcaccctcatgggtcagaagacctccctcacccaggagactgagctactg
gagtctctcctacaagaggtggaacatcagctgcgctcctgcagtaagagcgagttgatc
tccaagagcccagagatcctgctcatgttccagcaggttcaccgcaagcccatgcagtcg
tttgttaccaccccagtccccccagacttcaccagtgagctggttcctgcctatgactca
agcactttcgttctggcaaacttcagcaccctgagacagagggcagatcctgtctacagc
ccaccactccagatatctggcctctgttggagactcaaggtttacccagatggcaacggt
gtggtgcgtggcaattacctgtcagttttcttggaactgtctgcaggactccctgaaacg
tcgaagtacgagtaccgcgtggagatggttcaccaggcctccagcgaccccactaagaac
atcatcagggagtttgcgtcagactttgaggtgggggagtgctggggatacaaccgcttc
ttcagactggacctgctggccagtgagggctacctcaacatgcagactgacactctagtc
ctcaggtaccaggtgcgttcgcccaccttcttccagaagtgcagagaccaatactggtac
atcagccagctggagtcagcccagtccagctacatccagcagatcaacaatctcaaagag
aggctggccattgagctgatctgtaggcagcagtctcgcagctcgtcccctcctaaccgg
cgcctgggcccctcgacctcggagagagactcacgctcagggaaaggccccgtggctgag
ggcagctgccagaccactgacaccaaagaggaagaggaggaggaggaggaagagaagact
cagcacgatgactccaatgagctgtctgacggggatttggaggtggactgtctgacgggg
gatgaggtgaaccctctggacggcagcagcacatctggcagctccacggcaaccagcaac
acagaggagaacgacatcgacgaagagaccatgtctggggagaatgacgtggagttcagt
aggaacctggatatggaggagggagaactgcctgccgctgtggcaggagcagcaggaagc
tctaaccccggggccaggtctctgaggcatagtggtggtctctcctccgctggcagcaac
aacagtttgctagaaattgaccccgtcatcctcatccagctactggatctgaaggagcgc
agcagtgtggagtcactgtggggccttcaacccagaccccctgcctccctgctgcacagc
ccagtccaagtccactcaaggaaggagcggggtgaacgcaggcctcagacagtgaggcgg
ggagccccagactctggggtcctgattcggctcaaggcacagatggccgaggtgcgcagt
aagatgacggatgtcaagtgtcagctggaggcacggggggagaccaaggcagggccctcc
ggcggggccacaggggtggagcaggggccctcttaccactcagagctagggcccagcagg
aagcccatagagctagatctgatggggaaaggacctggggtctccagacattgtcgctct
ggagtgaagaaggcctcatctcccaagcaggatgggagcaggctgggcctaaggagggct
gcagacgtagttgagaaggagctgaggggccagagcggtggagagtcgtccagcgaccaa
agcctctttcccaggggcacctccaacggatcagagggagccctgaagccacgcagcacc
cacagctcccctccctatctgggcagctcgtcgtcctgctccgaaaacaaaccctgcagc
tccaaacacgaccaggagcagctctacgggtctgacatgtatgctctggaggtcctcagc
tgcatctccaccgccaccatggcacgacccaggaccaaaaccatgggggccggcctgctg
acggacagctctctggactgtgactcggagccggctgagatccgccagtcactgctcttc
ctggcagaggaaccctcttcatgccccaacgaaggtcatgttgtccagaagcggacggtg
gtactgctgccaggtatgagtagtgatagtgagatcgactgtgacacagagaacgaggac
gaggtggtggtcctggaggctggagattgtcgctacgacaccccggcactgccctgcgca
ggagaccagttgatctctgacctaagcttcaccacagtagagaccacagacaggtga
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