Oncorhynchus gorbuscha (pink salmon): 123999576
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Entry
123999576 CDS
T07892
Symbol
trpm4a
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 4a
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
123999576 (trpm4a)
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123999576 (trpm4a)
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
123999576
NCBI-ProteinID:
XP_046161443
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Position
LG16:complement(35211935..35306683)
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AA seq
1244 aa
AA seq
DB search
MGSASWISKIIKKRVCTTFIEDCLSNGALCQCGGERETHGSIATGDFFGAAIVSQWDSSQ
HSSEYPTDAFGELEFAEAGRRHSHFLRLSCDTTPQMVYTLMTAHWGVPSPNLVVSVVGGE
GCEKVKTWVREVLRQGLVRAAQSTGAWIVTGGLREGVSHCVGEAVRDHAAAASSLSQKKV
IAVGVAPWGLVHNRQQLINAQGSFPARYYVQNTSRDSCCLDNNYQAFLLVDDGSVGRRGG
EMVFRAKMEDYISHQRTGIWGSGSIDVPVLCMLISGDAAMLERVDLSLKKATPWLVLNGS
GPAADLICELLDALAAGPMSPPSPQPEGEGSKSPSAELRDRARERVQRHFTAEADLEKLV
DRALSIYQNRDLITVFHGDQESSDDFDTVLLKALVRASKRVSSDASEYTEQLKLAVAWNR
VDIAKSELFNGGIQWKYEDLEDSMTDALINDKPQFVRLFTENGLNILDYLTYRRLEGLYR
SLSDSSLAYTLLQRRLTERQGLAGSLPTVPCSLDRASLLKSPISEPSSAKELSLYEMSRL
LWDILGDVCEPFYYSPLKLDQSTSTRRALKHMKKLLLEECPYKEQRCLSPWASLFIWAVL
QNRSEMAVYFWEMAGESVLSALAGCKILRELSKLESETETKLSMKELAQKFENLALDVFS
ECYQSSERRSFTLLIRKSPVWGGATCLQMATAADARLFFSHDGVQSLLSQIWWGDMERST
KVWKLVLTFFLPPLIYTNLITFREQEEEGKSEEVTHGRDTDSLDGGDATVFSLADIMQTE
EDAEEYAALRAKLKGASNPKRPFILQRWREFWFAPVTSFLGNVLMYFLFLSLFAYILLVD
FKPPPPQGPSTLEFVLYFWVFTMVCEEIRQTFFVGSNTIYQRMSLYIQDMWNKCDILAIS
LFALGMCCRMFPWSYEFGRAVFAVDYMVFTLRLIHIFAIHKQLGPKIIIVGNMMKDIFFF
LFFLAVWLLAYGVANQALLYSYDPRPNWIFRRVFYRPYLHIFGQIPIHEMDADKLEEGIQ
CTNNATLIEAGAEPCMSTYANWLVVILLVIYLLVTNILLVNLLIAMFSHTFSKVQENSDT
YWKFQRYKLILEYHSRPCLAPPFIIISHLHLFIKRRIRRIPSVKIKHFVLEIHGRQASKL
NMWEAIQKENILSAQNKRERESDSERLKRTSVKVDSVLKQMVKIQDHNRRLRMLETELEY
CSSALSWMVDALSQSNLIKPTRPPPILRDLTPLSPTNCPMSDGE
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggctagttggatctccaagatcatcaagaagagagtgtgcaccacattcata
gaggactgccttagtaatggggcgctgtgccagtgcgggggtgagcgtgaaacgcacggc
tccatcgctacaggagacttcttcggggcggccattgtcagccagtgggacagctctcag
cactcctcagagtaccccaccgacgccttcggagagttggagttcgcagaggctggcagg
agacacagccatttcctgcgcctgtcgtgcgacaccacccctcagatggtatacaccctg
atgacagcccactggggggtaccctcccccaacctggtggtttctgtggtggggggtgaa
gggtgcgagaaagtcaagacctgggtcagggaggtgctgagacaggggctggtcagggca
gcacagagcacaggggcgtggatagtgacgggggggctgagggagggagtgagtcattgt
gttggggaagcagtgagggatcatgcggcggcggcctcctccctgtcccagaagaaagtc
atcgctgtgggcgtggccccctgggggttggtgcacaacagacagcagctcatcaacgca
cagggtagttttccagcacgatattatgtccagaacacatcccgtgactcgtgctgcctg
gataataactaccaggccttcctgctggtggatgatgggagtgtaggccggcggggaggg
gagatggtcttcagggccaagatggaggactacatctcccaccaacgcacaggcatctgg
ggcagtggcagtatagatgtccctgtattgtgtatgctcatctcaggggacgctgccatg
ctggagagggtggatctctctctgaagaaggctactccctggctggtgttgaatggttct
ggtccagcggcggaccttatctgtgagctgctggatgcactggcagccgggcccatgagc
cccccctctccccagccagagggtgaggggagcaagagccccagtgcggagctgcgcgac
agggcccgtgagagggtccagaggcacttcactgccgaggcagacctggagaagctggtg
gacagggctctgagtatctaccagaacagagatctgatcacagtgttccatggggaccag
gagagttctgatgattttgacacagtgctactgaaggctctcgtcagagccagtaaacgt
gtgtccagcgatgccagtgagtacacagagcagctgaagctagcagtagcctggaacagg
gtggacatcgctaagagtgaactcttcaatggaggcatccaatggaagtacgaggaccta
gaggattccatgacggacgcgctgatcaacgacaagccccagttcgtgcgtctcttcacc
gagaatggcctcaacatcctggactacctgacataccggcgtctggagggcctgtaccgc
tcgctttccgacagctctctggcctacacgctgctccagcgccgcctcacagagaggcag
ggcttggccgggtctctgcccaccgtcccctgctctctggacagggcctcgctcctcaag
agccccatatcagaaccctcgtcggccaaagagctcagcctgtatgagatgtcaaggctt
ctatgggacatcctgggagatgtgtgtgagcccttctactacagccctctgaagttggac
cagagcaccagcaccaggagagcactgaagcacatgaaaaagttgttgctggaggagtgt
ccatacaaggagcagcgctgtctctctccctgggcctctctgttcatctgggccgtgctg
cagaaccgcagcgagatggccgtctacttctgggagatggcaggggagtctgtcctcagt
gctctggcaggctgtaagattctgagggagctgtctaagctggagagtgagacggagacc
aagctctctatgaaggagctggcccagaagtttgagaacttggcccttgatgtgttcagt
gagtgctaccagagcagtgaaagacgctccttcaccctccttataaggaagtctcctgtg
tggggcggagctacctgtctgcagatggccactgcagctgacgcccgcctcttcttcagc
catgacggcgtgcagtctctgctgtctcagatctggtggggagacatggagaggagcaca
aaagtctggaaactggtcctcactttcttcttaccccccctcatctacaccaacctcatc
actttcagggaacaggaggaggaggggaagtctgaggaggtgactcatggtcgggacaca
gacagtctggatggaggagatgccaccgtgttttcccttgccgacatcatgcaaacggaa
gaggatgctgaggaatatgctgctttaagggccaaactgaaaggtgcctccaatcccaag
aggcccttcatattgcagcgctggagggagttctggtttgcgcccgtcacctcgttcctg
ggcaacgtgctgatgtacttcctgttcctctccctgtttgcttacatcctattggtggac
ttcaagcccccgccgcctcaaggcccgtccaccttagagtttgttctctacttctgggtc
ttcaccatggtctgtgaggagattcgacagacgttcttcgtgggcagcaacactatatat
cagaggatgagtctctacatccaggacatgtggaataagtgtgacatcttggccatctca
ctctttgccctgggcatgtgctgcagaatgttcccgtggtcctatgagtttggccgtgct
gtgtttgctgtggactacatggtgtttacccttcgtctcatccacatcttcgccatccac
aaacaactgggacccaagatcatcatcgtcggcaacatgatgaaagacatcttcttcttc
ctcttcttcctggcggtgtggctcctggcctacggcgtagccaatcaggcgctgctctac
tcctatgacccccgtcccaattggatctttcgcagagtgttctacaggccatacctccac
atatttggacagatccccatacacgaaatggatgctgataaactagaggaggggatacag
tgcaccaataacgcaaccctgatcgaggcgggggcagagccctgcatgagtacctacgcc
aactggctggtggtcatcctactggtcatctacctgttggtcaccaacatcctcctggtc
aatctgctcattgccatgttcagtcatacgttctcaaaagtgcaggagaacagcgacacc
tactggaagtttcagcgctacaagcttatcttggagtaccattccagaccctgcctggca
ccacccttcatcatcatctcccacctccacctcttcatcaagaggcgcatccgcaggatc
ccctccgtcaagatcaaacactttgttctggagatccatggtaggcaggccagtaaacta
aacatgtgggaggccatccagaaggagaatatactgtctgcccagaacaaacgagagaga
gagagcgactcggagagactcaaacgcacctccgtcaaggtggacagtgtcctaaagcag
atggtaaagatccaggaccacaaccgcaggctgagaatgctagagaccgagttggagtat
tgttctagtgccctctcctggatggtggatgctctctctcagagtaacttgataaaaccc
acacgtcctccgcccattctcagagatctgacccctctttctccaactaactgtcccatg
tctgatggagaatag
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