Oncorhynchus gorbuscha (pink salmon): 124000287
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Entry
124000287 CDS
T07892
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420
Nucleotide excision repair
ogo04110
Cell cycle
ogo04114
Oocyte meiosis
ogo04120
Ubiquitin mediated proteolysis
ogo04141
Protein processing in endoplasmic reticulum
ogo04310
Wnt signaling pathway
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124000287
04120 Ubiquitin mediated proteolysis
124000287
09124 Replication and repair
03420 Nucleotide excision repair
124000287
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124000287
04350 TGF-beta signaling pathway
124000287
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124000287
04114 Oocyte meiosis
124000287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124000287
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124000287
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
124000287
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124000287
Multi subunit type E3
SCF complex
Ring finger protein
124000287
Cul2 complex
124000287
Cul3 complex
124000287
Cul4 complex
124000287
Cul7 complex
124000287
Cul8 complex
124000287
Cul9 complex
124000287
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124000287
TCR (transcription coupled repair) factors
Cul4-CSA complex
124000287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
124000287
NCBI-ProteinID:
XP_046162507
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All DBs
Position
LG16:19980683..19983647
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgatacaccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacataatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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integrated database retrieval system