KEGG   Oncorhynchus gorbuscha (pink salmon): 124000287
Entry
124000287         CDS       T07892                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420  Nucleotide excision repair
ogo04110  Cell cycle
ogo04114  Oocyte meiosis
ogo04120  Ubiquitin mediated proteolysis
ogo04141  Protein processing in endoplasmic reticulum
ogo04310  Wnt signaling pathway
ogo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124000287
   04120 Ubiquitin mediated proteolysis
    124000287
  09124 Replication and repair
   03420 Nucleotide excision repair
    124000287
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    124000287
   04350 TGF-beta signaling pathway
    124000287
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124000287
   04114 Oocyte meiosis
    124000287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    124000287
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124000287
Enzymes [BR:ogo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     124000287
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   124000287
  Multi subunit type E3
   SCF complex
    Ring finger protein
     124000287
   Cul2 complex
     124000287
   Cul3 complex
     124000287
   Cul4 complex
     124000287
   Cul7 complex
     124000287
   Cul8 complex
     124000287
   Cul9 complex
     124000287
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124000287
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124000287
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 124000287
NCBI-ProteinID: XP_046162507
LinkDB
Position
LG16:19980683..19983647
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgatacaccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacataatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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