Oncorhynchus gorbuscha (pink salmon): 124000314
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Entry
124000314 CDS
T07892
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124000314
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M10
124000314
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_3
Reprolysin_5
DUF4953
EarP
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
124000314
NCBI-ProteinID:
XP_046162545
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All DBs
Position
LG16:65935878..65944322
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AA seq
473 aa
AA seq
DB search
MKTFNLCLLLVNLAIVVYSLPILPPTEEDEALAETYLKKFFNLTEETGPMFRRGPSQRSR
KVSEMQRFFGLKVTGTLDAETVKMMKKPRCGLPDVQLGRFTTFNNLKWPTNQLTYRIEDY
TPDMSVAEVDNSIERALQVWAKVSPLRFTRIYRGTADIMISFGNRNHGDFYPFDGPEGTL
AHAFSPGADIGGDAHFDDDEYFTFSSTRGYNLFLVAAHEFGHSLGLSHSNDPGALMFPVY
SYTDPSTFSLPRDDVTGIQYIYGPNQDVNPNPDKPDPTPVSTPDACDPTLVLDAVTTLRG
EKMFFKGRFFWRIYPQSSKPHQNLIKTFWPELPDNINAAYESQLSDRVFLFKDHQVWALY
GYDIVPGYPRNLKSLGLPRTVKKVDAALYDEYSRKTLFFVGDNYYSYDEEMKSMDRGFPK
RVDEQFPGMTSKVTAAFQVRGFTYLYSGPYMFEYNMRTRRQFRVLGNNYFLPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcaatctgtgcttactactagtcaacctggcaatagtggtttactctttg
ccaatattgccacctactgaagaagatgaagcccttgcagagacgtacctgaagaagttc
tttaacctgacggaggagacgggtccaatgttcagacgggggcccagccagcggagcagg
aaagtcagcgagatgcagaggttctttggcctcaaggtgacaggaaccttggatgctgag
accgtaaagatgatgaagaagccacgctgcgggttacctgacgtccaactcggccgattc
accaccttcaataaccttaagtggccaacaaaccagcttacctacagaattgaggactac
actcctgacatgtctgtggctgaggttgacaactccatagagagagcactacaggtgtgg
gccaaggtctcccccctgaggttcacccgtatctaccgcggcaccgctgacatcatgatc
tccttcggcaacagaaatcatggtgatttctaccccttcgatggccctgaaggcaccctg
gcccatgccttctcccccggcgctgacattggaggagatgctcattttgatgatgatgag
tacttcaccttcagctcaaccagagggtacaacctgttcttggtggctgcccatgagttt
ggccattccctgggtctcagccattccaacgaccctggagcgctgatgttcccagtgtac
agctacacagatcccagcaccttctctctgcctcgtgatgatgtcaccggtatccagtac
atatacggcccaaaccaagatgttaaccccaacccagataagcccgaccctacacctgtt
tccacccctgatgcctgtgaccccaccctggtcctggatgctgtcaccactctgcgtggg
gagaagatgttcttcaagggcaggttcttctggcgtatttaccctcagagcagcaaacca
catcagaacctcatcaagactttctggcctgaactccctgacaacatcaatgctgcttat
gagagccagctatctgacagagtgttcctctttaaagaccatcaggtctgggctctctat
ggctatgacatcgtccccggctatcccagaaacctgaagagcttgggtctgcccaggacc
gtgaagaaagttgatgccgccctgtacgatgaatattctcgcaagaccttgttctttgtt
ggcgacaactactacagttacgatgaggaaatgaaaagcatggacagaggtttccccaag
cgtgtggatgaacagttcccaggcatgacaagcaaagtgactgcagccttccaagtccga
ggcttcacctacctctatagtggcccctacatgtttgaatacaacatgaggaccagaaga
cagttccgcgtgctaggaaacaactacttcctgccttgttag
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