Oncorhynchus gorbuscha (pink salmon): 124001364
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Entry
124001364 CDS
T07892
Symbol
bcl11ba
Name
(RefSeq) LOW QUALITY PROTEIN: BAF chromatin remodeling complex subunit BCL11B a
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124001364 (bcl11ba)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124001364 (bcl11ba)
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_15
zf-H2C2_5
DUF3268
DUF7565
Motif
Other DBs
NCBI-GeneID:
124001364
NCBI-ProteinID:
XP_046164060
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All DBs
Position
LG17:36283262..36351460
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AA seq
825 aa
AA seq
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MSRRKQGNPQHVSQRELIAPAEADHVDGGLSVSDSLTQPHPHPQPHPHLQSHPHPHPLLS
HPALLDPSLSDSLAMGLGDHDLLTCGQCQMNFPLGDILLFIEHKKKQCQALLQGPGCYDK
MAADRSSPSPPHQQQQNQGRHGHSQLRKVVEPVEIGIQVTPEEEEDERLMVTPTKGICPK
QESALAGGRDEPSSYICTTCKQHFPSAWFLLQHAQNTHGIRIYLESNPSSASLTPPHHHP
GPPMGQDSIPQSPLTNFLGESNPFHLLRMTGPMLREPPPGFMENRGGLPNTPPFVSPPPR
HHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPMAIESQSMDFSRRLRQLAGNNNVATP
PLSPSRVNPMHRLLNPNPFQPSPKSPFLSTPPLPPMPPNSTTPPQTQAKSKSCEFCGKTF
KFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKSGSMTGRSDDGLSTTS
SPEPGTSDVTGEGMKNRDGDFRGEGEEEEEEEEEEEPENESRPESNFSMDNMEFYRNREN
GSKPPSDEKNALSLGKMVESVGLSTIQQYNNLIVDNRKNRMLFSKRGSDGQRDTGDEDSV
VGEMEREHHHHQMERDHQKPTVNGRNCGSGDSFSGLFPRKPTPITSPCLSNSSNKRIKIE
KDLEMPPAPLIPSENVYSQWLVGYAASRHFIKDPFLGFTHSRQSPFGTSSEHSSENGSLR
FSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKESRRSDTCEYCGKVFKNCSNL
TVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQMGLPVMCS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcaggggaacccacagcacgtgtcacagagggaattaatagcaccg
gcggaggctgaccatgtggatggcggactttccgtgtctgactccctcacccaacctcac
ccccaccctcaacctcaccctcaccttcaatctcacccccatccccaccccctgttgtcc
cacccggccctgctggaccccagcctatccgacagccttgccatggggctgggggaccac
gacctgctcacctgtggccagtgtcagatgaacttccccctgggagacatcctgctcttc
atcgagcacaagaagaagcagtgccaggccctactgcaaggtcctggctgctacgacaag
atggccgccgaccgcagcagcccctccccgccccaccagcagcagcagaaccagggtcgc
cacggtcacagccagctgaggaaagtggtggaaccggtggaaatcggaatccaggtgaca
ccggaggaggaagaggatgagaggctgatggtgacgcccaccaaaggaatttgccccaag
caggagagtgccctggcaggaggaagggatgagccttcaagctacatctgcaccacgtgt
aagcagcacttccccagcgcctggttccttctacagcacgcccagaacacccacggcatc
cgcatctacctggaatccaacccctccagcgcatcgctcacccccccgcatcaccatccc
ggcccccccatgggccaggactccatcccccagtctcccctcaccaatttcctgggagag
agcaaccccttccacctactgaggatgaccgggcccatgctccgagagccccctccaggc
ttcatggagaaccgcggaggcctccccaacacacctcccttcgtcagccccccaccccgc
caccacctggacccccaccggctggaacgccttagtgccgaagaaatggggctcatctcc
cagcaccccagtgccttcgagagggtgatgcggctgacgccgatggccatcgaatcccag
tccatggacttctccaggcggctccggcagctggcagggaacaacaacgtggccacccct
cctctgtcgcccagccgggtcaaccccatgcaccgcctgctcaaccccaaccccttccag
cccagcccaaagtctccctttctcagcaccccgcccctgccgcccatgccccccaacagc
accaccccgccccagacgcaggccaagagcaagtcatgcgagttctgtgggaagaccttc
aagttccagagtaacctggtggtccaccggcggagccacaccggggagaagccctataag
tgtcagctgtgtgaccatgcctgctcccaggccagcaagctgaagagacacatgaaaaca
cacatgcataagtctggttccatgacaggacggtctgacgacgggctctccaccaccagt
tcaccggagccgggcaccagcgacgtgacaggagagggcatgaagaaccgagatggagac
ttcaggggtgagggcgaagaggaggaagaggaggaggaggaagaggagccggagaacgag
agcaggccggagtcaaacttcagcatggacaacatggagttctaccgtaaccgtgagaac
ggctccaagccgccatcagacgagaagaatgccctctctctgggcaagatggtggagagc
gtgggcctgagcactatacagcagtacaataacttgatagtcgacaatcgtaaaaatcgg
atgctcttctccaagagggggtccgacgggcagcgggacactggggatgaggactctgtg
gtgggagagatggagagggagcaccatcaccaccagatggaaagggaccaccagaagccc
acggtcaacggcaggaactgtggctccggcgactctttctcaggcctgttcccccgcaaa
cccactcccatcaccagcccctgcttgtccaactcctccaacaagaggatcaagatcgag
aaggacctggaaatgcccccggcgcccctcatcccctccgagaacgtctactcccagtgg
ctggtgggatacgctgcctcacgacatttcatcaaagaccctttcctgggctttacccac
tccagacaatctccctttggcacctcctctgagcactcgtctgagaacggcagcctgcgt
ttctccacgcctcccggggacctcctggatggcggcctgtcggggcgcagcggcacagcc
agcgggggcagcactcctcacttggggggcccgggacctggccggcccagctccaaggag
agccgacggagcgacacctgcgagtactgcggcaaggtgttcaagaactgcagcaacctg
acagtgcaccgacgcagccacacgggagagaggccctacaagtgcgagctgtgcaactac
gcctgcgcccagagctccaagctcacccgccacatgaagacccacgggcagatggggctc
cctgtgatgtgtagttga
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