Oncorhynchus gorbuscha (pink salmon): 124001456
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Entry
124001456 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, mitochondrial-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124001456
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
124001456
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124001456
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
124001456
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124001456
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124001456
Prokaryotic type
Other AARSs
124001456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
124001456
NCBI-ProteinID:
XP_046164159
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All DBs
Position
LG17:complement(16836059..16859349)
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AA seq
1007 aa
AA seq
DB search
MLLCRISAVSQSVARWGTSVRRGALLHPALSFNTSRCQNVSSTEGTVHPAAAQGAGPYRD
SVLLPRTEFPMKLTGQNLIDREVQIQQECGFAELYSWQRERKAKKEYCLHDGPPYANGDP
HVGHALNKILKDIQNRFEMLRGKQVHYVPGWDCHGLPIELKALGELGTSGLSPLQIRQKA
REFAEGAIARQRAAFQRWGVMADWDKCYYTFDGTYEAAQLKVFQDMHSKGLIYQDYKPVF
WSPSSRTALAEAELEYNPQHVSKAIYATFALATLPPKMAEAVGELGSISVLVWTTQPWTI
PANQAVCFMPNAQYSVVKRRDSSQLLLVATERVSSLATLLSTELETVGTFTGTELEGGVC
QHPTIPRKEVPLLPANFVTMGKGTGLVHTAPAHGMEDYSVASHFKLSVECIVDEEGRFTE
LAGPELQSLSVMGEGNDTVISMLKAVGSLVKEEECVHSYPYDWRSKEPVVIRPSKQWFID
IASLKDKAKEVLAKVRVIPESARGSLLAHLDRRPYWCISRQRSWGVPIPVFYHKETGEPL
INKHTVSHVTQLFSEKGSDCWWELPLESLLPPEVLKKSKAGEVTDYERGDDVLDIWFDSG
TSWAAVLEDSRADVYVEGKDQIGGWFQSSLLTSVAVQKRAPYKALMIHDFVISEKGEKMS
KSLGNVVDPDTVIHGGEDPSVSPAYGVDVLRWWVAESNVFSEVQIGPNVLNSARDSINKL
RNTLKFLLGNXAGFDPRTQAVDPKEMHYIDQYLLHLLRNYSMKMTDAYNDFGAGRAIRLL
QAFITRDLSKFYFSIIKDRLYCDPEDSLGRRSCQTVLEEILDGVTRSIAPILPHLAEEVY
LHAPGHNEGETLFRSGWIKSSPVWRRPGLEEAVEGACAIRDSFLSSIPGRNAAEYELTIE
IEPGLLFELIESLQDEPTSSYSQLTELMMSSQTTLTSALPRDLPADALISNGSFLINLEG
GVIREDSAYQVAAVPTSMARCPRCRRYTSSSPDCPCPRCQTILTGAQ
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtgccgcatttcagcagtgagccagagcgtagcgagatggggaacgagtgtt
cggagaggcgcccttctccaccccgcactctccttcaacaccagccgttgtcaaaatgtc
agctccaccgaaggtacggttcaccctgcagccgcccagggtgccgggccgtaccgcgac
agtgtgttgcttccccgtactgaattccccatgaaactaaccggacagaatctcatagac
cgggaggtacagatacaacaggagtgtggctttgcagaactctactcatggcagagagag
aggaaggccaagaaggaatactgtctccacgatggccccccatacgccaacggggaccca
catgtggggcatgccctcaataagatcctcaaagacatccagaaccgctttgagatgctg
agggggaaacaggttcactatgtcccaggctgggactgccatgggctgcccattgagctg
aaggcactgggagagctgggaaccagtggactgagccctctgcagataagacagaaagct
cgggagtttgcggagggggcgatcgctcgtcagcgcgctgccttccagcgctggggtgtg
atggcggactgggataagtgctactacacctttgatgggacttatgaggcagctcagctt
aaggtcttccaggacatgcacagcaagggtctgatctaccaggactacaagccagttttc
tggtctccttcctccaggacagctcttgcggaggcagagttggagtataacccacagcac
gtgagcaaagcaatctatgccaccttcgccctggccaccctgccccctaagatggcggaa
gctgtaggggagttgggcagcatttctgtgttggtgtggaccacccaaccatggaccatc
ccagccaaccaggctgtctgctttatgcccaatgcccagtactcagtagtgaagaggaga
gacagctcacagctcctcctagtggccactgagcgcgtttccagcctggcaacactgctg
agcacagagctggagactgtgggcactttcacaggtacagaacttgagggaggagtctgc
cagcatcccaccattcccaggaaggaggttccattgcttccagctaattttgtgaccatg
ggcaaaggaacgggattggttcacacagctcctgcccatgggatggaggactacagtgtg
gcctctcactttaaactatcagtggagtgtatcgtggatgaggaaggcaggttcactgag
ctggctgggcctgagctacagagtctgtctgtgatgggggagggcaacgatacagtgatc
tccatgctgaaggctgtcggttctctagtgaaggaggaggagtgtgtccacagttacccg
tacgactggaggagtaaagagcctgtagtcatcagacccagcaaacagtggttcattgac
atcgccagcctcaaagacaaggccaaggaagtgctggctaaggtgcgtgtgatcccagaa
tcggcgaggggcagtctgttggcccacctggacagaagaccgtactggtgtatctcacgc
cagaggagctggggtgtgcccatacctgtgttctaccacaaggagacaggagagcctctc
attaacaagcacactgtatcccatgtgacccagctgttctcagagaagggcagtgactgc
tggtgggagctgcccctggaatctctactgccaccagaggtgctcaagaagagtaaagca
ggagaggtaacagactacgagcgtggagatgatgtgttggacatttggtttgacagtgga
acctcctgggctgctgttcttgaagactcgagggctgacgtgtatgtggagggaaaggac
cagataggtggatggttccagtcctctctgctcaccagtgttgccgtgcagaaaagggct
ccctacaaggctctgatgatacatgactttgtgataagcgaaaaaggagagaagatgtcc
aagtctttaggcaacgtagtagaccccgatacagtcatccacgggggagaggaccccagt
gtgtctcctgcctatggagtggatgtgttgcgttggtgggtggcagagtccaacgtcttc
tctgaggtccagatcggccccaacgtgctcaactcagccagagacagcatcaataagttg
aggaataccctgaagttcttgctagggaatnctgcagggtttgaccctcgtactcaggca
gtggaccctaaagaaatgcactacatcgaccagtacctactgcaccttctacgtaactac
agtatgaagatgacagatgcctacaatgattttggtgcaggcagggccatccgcctgctc
caagccttcatcaccagagacctctccaagttctacttcagcataatcaaggacaggctg
tactgtgatcctgaggactcgttgggtcggcggtcctgtcagacggttctagaggagatt
ctggacggagtgacgcgctccatcgctcctatcctacctcacctggccgaagaggtctac
ttacacgccccaggacataacgagggggagaccctgttcaggagtggctggattaagagc
agtcctgtgtggcggaggccgggattggaggaagccgtggagggggcatgcgctatcagg
gattccttcctgtcctctatcccaggacgcaatgcagccgagtatgagctgaccatagag
attgagcctggcctactgtttgaactcattgagtctctccaagacgaacctacttcctct
tactctcagctaacagagctgatgatgtcatcgcagacaaccctgactagcgccctgccc
agagacctgcccgctgatgccctcatcagcaacggcagtttcctcatcaaccttgagggt
ggggtcatccgtgaggacagtgcttaccaagtagcggcagtgcccacctccatggcccgg
tgcccgaggtgccggcggtacacctcaagctctccagactgcccctgcccccgctgccag
accatccttactggggcgcagtga
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