Oncorhynchus gorbuscha (pink salmon): 124001730 Help Entry 124001730         CDS       T07892                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo04115   p53 signaling pathway ogo04145   Phagosome ogo04148   Efferocytosis ogo04350   TGF-beta signaling pathway ogo04510   Focal adhesion ogo04512   ECM-receptor interaction ogo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ogo00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     124001730   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124001730  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     124001730    04148 Efferocytosis     124001730   09143 Cell growth and death    04115 p53 signaling pathway     124001730   09144 Cellular community - eukaryotes    04510 Focal adhesion     124001730   09142 Cell motility    04820 Cytoskeleton in muscle cells     124001730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ogo04131]     124001730   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ogo00536]     124001730 Membrane trafficking [BR:ogo04131]  Endocytosis   Phagocytosis    Opsonins     124001730 Glycosaminoglycan binding proteins [BR:ogo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124001730 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS VWC2L_2nd EGF_3 TSP1_CFP_C cEGF Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  124001730 NCBI-ProteinID:  XP_046164702 LinkDB All DBs Position LG17:23144564..23154049 Genome browser AA seq 1172 aa AA seqDB search MKLIGVFLLLVLWTCEGSRVAESGDDNGVYDLFELVKVNKRHQGVTLVKGADPYSPAYKV LNADLIPPVPEISFRDLIDSVQAERGFLLLVNFKQFKKTRGSILTVEKNDGSGPIFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEIDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAIMRNKGCQSSETLADV MTLDNPVNGSSPAIRTDYTGHKSKEIQQACGFSCEDITSMFKELKGLGVVVKQLSNELNR VNKESTLLMNQMRIHSGVCLHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQKSPCPIDGVWGPWSLWDTCSVTCGGGFQTRQRLCNNPTPKYGGKECQGNGKTS QLCGKEDCPIDGCLSNPCFAGAKCTSFDDGSWKCGACPVGYTGDGINCKDIDECKEVRDA CFTLNGVHRCENTEPGYNCLACPPRYSGQQPFGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDRDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL ENNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECKDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgataggagtatttctccttttggtgctttggacttgtgagggcagccgggta gcagagagtggagatgataacggtgtatacgacctattcgagcttgtgaaagtgaacaag aggcaccaaggagttaccttggtgaaaggcgcagatccctacagcccagcctataaggtt ttgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattca gtacaagctgaaagaggattccttctcctcgtcaatttcaagcagttcaagaaaaccagg ggtagtattttgactgtggagaagaatgacggatcaggaccgatattcgaaattatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcagatctagcgacaggacattggaagaatatcacgctgttcattcag gaagatcgtgcccagctgttcgtaggatgtgaagagatcaatatatccgaaatagacgtg cccatccaaaaggtcctgacgcatgaggttgctgacattgcccgtctgagaattggaaaa ggagctgtgaaagacagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcaatcatgcgcaataagggatgccaaagctctgaaacattggctgatgtc atgaccctggacaacccagtcaatgggtctagcccagcaataaggactgattacactggc cacaaaagcaaagaaattcagcaggcctgtggcttttcctgtgaggatatcaccagcatg ttcaaggagctcaagggactcggcgtggttgttaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactttgctcatgaaccagatgagaatccacagtggggtctgtctt cacaacggcatcgtgcacaaggacaaagatgagtggaccgtggacggctgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgtcccctgatgccctgtgcc aacgccaccgtgcccgatggagagtgctgcccacgttgtggaaccccgagtgactatgct gaggatggctggtccccctggtctgaatggactcattgttctgtgtcttgtggacgggga atccagcagagaggtcgatcatgcgatcgcatcaacagcaactgcgagggcacctctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgcttcaagcaggatggtggctgg agccactggtctccctggtcctcctgctctgtgacatgtggtgaaggagtcatcacccgc attcgcctttgcaactccccaactccccagatgggaggcagagactgccaaggacagggc agagagaccgaggtctgccagaaatcaccatgtccaattgatggagtctggggaccctgg tctttatgggacacctgctctgtcacctgtggaggtggattccagactcgccagcgtctt tgtaacaaccccacccccaaatacggaggaaaggaatgtcagggcaacggcaaaacatcc caactgtgtggaaaagaggactgccctattgatggctgtctgtccaacccctgctttgct ggtgctaagtgtaccagctttgatgatggttcctggaagtgtggcgcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgatgagtgcaaggaggtccgtgacgca tgcttcacactcaatggagtccaccgctgtgagaacactgagcctggctacaactgcctt gcctgcccccctcgctactcaggacaacagcccttcgggagaggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgccaactgtatctacctgggtcagttcagcgacactatgttccgctgtgagtgc aaaccaggttacgctggcaacggccacatctgtggagatgacactgacctggatggatgg cccaacaaagacctcctgtgtgtggagaatgccacctaccactgcaagaaggacaactgt ccaaaccttcccaactctggacaggaggatcacgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaacgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacagagatgacgttggtgatcgatgtgataactgtgtg catgagagcaaccccgaccaagtcgacacagacaacaacggagagggggatgcctgtgct attgacattgacggcgatggcattctaaatgagcgggacaactgcccatacgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgcgacaattgccctctt gaaaacaacccagaccagattgactctgactcagaccgtgtgggagacaagtgcgacaac aaccaagacattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aatgccaaccaggccgaccacgacaaagacggcaagggtgacgcctgtgaccacgatgat gacaacgacggtatccctgacgacaaggacaactgtaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagataac atacttgatatctacgatgtgtgccctgagaactttgccatcagtgagacggacttccgc aggttccagatggtaccactagaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcaccagggcaaagaactggtgcagaccgtcaactgtgaccctggcatcgctgtt gggttcgatgagttcaacgcagtggacttcagtggaacattctttatcaacacagacagg gacgatgactatgctggatttgtgtttgggtaccagtccagctccaggttctacgtggta atgtggaagcagatcacacagacctactggtcccacacgccgaccagagctcagggctac tccggagtgtccatcaaagtggtcaactccaccacaggacctggggagcatctgaggaac gcgctctggcacaccggtgacactgctggacaggtgcgtactctgtggcacgaccccaag aacatcggctggaaagactacactgcctacagatggcacctgatccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggccgattccggaaatatc tacgacaagacctatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatatgaatgcaaagattcttaa

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