Oncorhynchus gorbuscha (pink salmon): 124001950
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Entry
124001950 CDS
T07892
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04620
Toll-like receptor signaling pathway
ogo04621
NOD-like receptor signaling pathway
ogo04622
RIG-I-like receptor signaling pathway
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124001950 (traf3)
04621 NOD-like receptor signaling pathway
124001950 (traf3)
04622 RIG-I-like receptor signaling pathway
124001950 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124001950 (traf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
DUF4559
BLOC1_2
zf-TRAF_2
CCDC113_CCDC96_CC
zf-RING_UBOX
CALCOCO1
DUF1664
zf-RING_6
Snapin_Pallidin
Fez1
DNA_topoisoIV
Spc7
Sina_ZnF
TolA_bind_tri
FapA
Motif
Other DBs
NCBI-GeneID:
124001950
NCBI-ProteinID:
XP_046165079
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All DBs
Position
LG17:33780616..33796581
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AA seq
573 aa
AA seq
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MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISDQLSKPNPVCPEDKEPLFKDKVFRDVCCHREIM
ALRVYCRSEKSGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSCKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgatcagctaagcaaaccgaatccagtatgtccagaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgaaaagagcggctgtaaggagcagatcagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttgcaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacgagtcatcaacacgagtgtcccaaggctcatgtcacctgc
tcctttattcgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccagaaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccgggcctgagc
agccgtctgtctgaaacattgtctcactacgaggagatgagggagaagaatagacagctg
gaccagaaactcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtggagaccctccgagga
accgtggagagcatccgctccagagtcgccactctagaaggagggcggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgacgacatgctgagcgtccat
gagatccgactagcagacatggacctgcgcttccaggtcctagagactgcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggagacggcatggggaaaggaacccacttgtcgctgttcttc
gtggtgatgcgtggcgagtacgatgcccttctgctctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcaggctgcccg
ctgttcgtggcccagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga
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