KEGG   Oncorhynchus gorbuscha (pink salmon): 124001950
Entry
124001950         CDS       T07892                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04620  Toll-like receptor signaling pathway
ogo04621  NOD-like receptor signaling pathway
ogo04622  RIG-I-like receptor signaling pathway
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124001950 (traf3)
   04621 NOD-like receptor signaling pathway
    124001950 (traf3)
   04622 RIG-I-like receptor signaling pathway
    124001950 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124001950 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_2 DUF4559 BLOC1_2 zf-TRAF_2 CCDC113_CCDC96_CC zf-RING_UBOX CALCOCO1 DUF1664 zf-RING_6 Snapin_Pallidin Fez1 DNA_topoisoIV Spc7 Sina_ZnF TolA_bind_tri FapA
Other DBs
NCBI-GeneID: 124001950
NCBI-ProteinID: XP_046165079
LinkDB
Position
LG17:33780616..33796581
AA seq 573 aa
MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISDQLSKPNPVCPEDKEPLFKDKVFRDVCCHREIM
ALRVYCRSEKSGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSCKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgatcagctaagcaaaccgaatccagtatgtccagaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgaaaagagcggctgtaaggagcagatcagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttgcaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacgagtcatcaacacgagtgtcccaaggctcatgtcacctgc
tcctttattcgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccagaaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccgggcctgagc
agccgtctgtctgaaacattgtctcactacgaggagatgagggagaagaatagacagctg
gaccagaaactcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtggagaccctccgagga
accgtggagagcatccgctccagagtcgccactctagaaggagggcggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgacgacatgctgagcgtccat
gagatccgactagcagacatggacctgcgcttccaggtcctagagactgcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggagacggcatggggaaaggaacccacttgtcgctgttcttc
gtggtgatgcgtggcgagtacgatgcccttctgctctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcaggctgcccg
ctgttcgtggcccagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga

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