Oncorhynchus gorbuscha (pink salmon): 124004854
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Entry
124004854 CDS
T07892
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
KO
K06752
MHC class II antigen
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145
Phagosome
ogo04514
Cell adhesion molecules
ogo04672
Intestinal immune network for IgA production
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124004854
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124004854
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124004854
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124004854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124004854
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124004854
Exosomal proteins of epithelial cells
124004854
Exosomal proteins of breast milk
124004854
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Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
124004854
NCBI-ProteinID:
XP_046169642
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Position
LG19:21010257..21012192
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AA seq
322 aa
AA seq
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MHHGSLLGLLGDWMHHGSLLGLLGDWMHHGSLLGLLGDWMHHGSLLGLLGGWMHHGSLLG
LLGGWMHHGSLLGLLGDWMHHGSLLGLLGDWMHHGSLLGLLGDWMHHGSLLGLLGGWTFC
HSDPGGYQFQGIVDCEYDDTTDNMIYFVKNIFNQKLTTIYDSRVQKYVGFGEFGIRNADH
YNSQAWEMAIRKAEVETICRYSARFFKLSTLERIVPPIVKARLTKPSHYGEVSMLECSVL
GFYPQEVRVSWLRDRLGTTIAVTSTDTLANGDWSYQLHSYLEFRLQRGESVSCIVEHPSL
DEPLEVVCGERPGEEREYCGLE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatggctctctgctgggtctattgggtgactggatgcaccatggctctctgctg
ggtctattgggtgactggatgcaccatggctctctgctgggtctattgggtgactggatg
caccatggctctctgctgggtctattgggtggctggatgcaccatggctctctgctgggt
ctattgggtggctggatgcaccatggctctctgctgggtctattgggtgactggatgcac
catggctctctgctgggtctattgggtgactggatgcaccatggctctctgctgggtcta
ttgggtgactggatgcaccatggctctctgctgggtctattgggtggctggactttctgc
cattcagacccaggtgggtaccagttccaggggatagttgactgtgaatatgatgacacc
actgataatatgatttactttgtgaaaaacatattcaaccaaaaattgaccaccatctat
gactccagggttcagaagtatgtgggttttggggagtttggcatacgcaatgcagatcac
tacaacagccaagcttgggaaatggctataaggaaagcagaagtggagactatttgccga
tacagtgcaagattcttcaaactgagcactttggaaagaatagtgcctcccattgtcaaa
gcccgcctgaccaagccctctcactacggggaggtgtccatgctggagtgcagcgttcta
ggcttctaccctcaggaggtgagggtgagctggctgagagacaggctggggaccaccata
gctgtgacctccacagacacactggctaacggggactggagctaccagctccactcctac
ctagagttcaggcttcagagaggggagagtgtaagctgcatagttgagcaccccagccta
gatgaaccactggaggtggtctgtggtgagagacctggggaagagagggagtattgtggt
ctggagtga
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