Oncorhynchus gorbuscha (pink salmon): 124005686
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Entry
124005686 CDS
T07892
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A isoform X1
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04060
Cytokine-cytokine receptor interaction
ogo04150
mTOR signaling pathway
ogo04210
Apoptosis
ogo04217
Necroptosis
ogo04920
Adipocytokine signaling pathway
ogo05132
Salmonella infection
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124005686 (tnfrsf1a)
04150 mTOR signaling pathway
124005686 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124005686 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124005686 (tnfrsf1a)
04217 Necroptosis
124005686 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124005686 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124005686 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
124005686 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ogo04050
]
124005686 (tnfrsf1a)
04090 CD molecules [BR:
ogo04090
]
124005686 (tnfrsf1a)
Cytokine receptors [BR:
ogo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
124005686 (tnfrsf1a)
CD molecules [BR:
ogo04090
]
Proteins
124005686 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Phage_holin_3_6
RFC_C
Motif
Other DBs
NCBI-GeneID:
124005686
NCBI-ProteinID:
XP_046171104
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All DBs
Position
LG19:6999036..7008778
Genome browser
AA seq
401 aa
AA seq
DB search
MDVLRGKWKEKCILNVCALLLVCWSVDPSLSAPPPPDRTRELQCLEGSHYRTANGTCCRK
CHEGLKLKEDCTKEGESQCEPCKEGRTYLERSNYARNCLRCTRCDVDNEEEVSPCKKNRN
AVCRCIEGFYKKRINSVTRECLRCKTCGPGERETQPCTPESDTVCECKDFRNKKNNRNCL
PCQNCRSADCQQECASGTDPTPKPKDTGWGVWSPYLLAAFGCVCVVLLVVMGIMGVLVVR
RKPKGSSSFLSAEITSQGSEKSTRRLIQEASENVLNQSIPSCSPVCECEQELLSKLPNCV
PKEIKISELIYSVLDQVPLRRVKELVRSLGVSDIVIERAENDHLRDTKEAQYQMLRVWAK
GSAQGGGGVLARPLLYHLLDKLRAMDLGGTAEELETKYGDQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcttgagagggaaatggaaggaaaaatgcattctgaacgtctgcgctctgctc
ctagtgtgctggtcagtagacccctccctctcggcaccaccacctcctgataggacccgg
gagttgcaatgccttgaggggagtcattaccgtactgctaacgggacatgctgtcgaaag
tgccatgaagggcttaagttgaaggaggactgcactaaagagggtgagagccaatgtgaa
ccctgtaaagagggcaggacatacctagagaggagtaactacgccaggaactgcctccgt
tgtacacgctgtgatgtagacaatgaggaagaggtgtcgccatgcaagaagaataggaac
gcagtgtgtcgctgcattgaaggcttctacaaaaagagaataaactcagtaacacgggag
tgcctccgttgcaagacatgtggacctggagagagagaaacgcaaccatgtactccagag
agcgatacagtgtgtgaatgtaaggacttccgaaacaagaaaaacaacaggaactgtctt
ccatgccaaaattgtagatcagctgactgccaacaggagtgtgcttcaggcacagatccc
actcccaaacctaaagacactggatggggtgtttggtctccctacctgttggctgcgttc
ggctgtgtttgtgtggtgctgctggtggtgatggggatcatgggcgtactagtggtccga
cggaaacccaaggggtcaagctcctttctctctgctgagatcacctctcagggctccgag
aagtctactcggaggctgatccaagaggcctcagagaacgttctcaaccagagtatccct
tcatgtagcccagtgtgtgagtgtgaacaggagctactcagcaagctaccgaactgtgtc
cccaaggagatcaagatctctgagttgatctactcggtgttggaccaagttcctctgcgt
cgtgtgaaggagctggtgcgttcgctgggtgtgagtgacatcgttatagagagggctgag
aatgaccacctccgtgacactaaggaagcccagtaccagatgctgagggtctgggctaag
ggaagtgctcagggagggggaggggtgctagcacgccctctactgtaccacctgctggat
aagctgagagccatggacctgggagggactgcagaggagctggagaccaagtatggagat
cagtag
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