Oncorhynchus gorbuscha (pink salmon): 124005850
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Entry
124005850 CDS
T07892
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124005850
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124005850
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124005850
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124005850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
124005850
NCBI-ProteinID:
XP_046171433
LinkDB
All DBs
Position
LG02:complement(61297678..61328299)
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AA seq
1036 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLITCFTIGLLFPIFSLVYLLAPRSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPREEWEMWHPTL
IAEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTHNRLCGRDHPSPDNPRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSS
SEATQQDEANEEEGAGQAQGQSRDQGAKGVSFSTSIAERKNKDSGFSVSTLFKSMSGAEG
AVDNKPKCNGLRFSSSPPPSAALTRSSGRLQRFSKSKRDSIRRLGLLFSRMNGHVPEPRS
PPPRMHQPTYSISGGLLRQPTTWPDIQIPPNPPVTHSLFHLGVNLNELPHAPPQALPLGS
PQQANGSDSLLLRPAGHSLPPPGHSLHCASSITASSSRAVLLGSSEDMFEGWIGPCDELD
SSEGGSEQEESITTQL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgttgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtac
ctgacggcggtggagaagggtgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtgaactgcctggacccgctggggcgcagcgcgctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtg
ggcgacgcactgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctg
tcccatcgcaggtccagcagagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgag
atcatcaagctgctggtccagcgcaaggtgaccatcccccggccccaccagatccgctgc
gactgcgtggcgtgtgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgc
ctcaacgtctacaagaccctggccagcccgtccctcatcgccctgtccagcgaagacccc
atcctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaacgag
ttccgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagt
gaggagctagacccacaggactgccgtgacttggccaagctcaaactagctatcaagtac
caccagaaagagtttgtgtcccagccaaactgtcagcagcttctggccaccctgtggtac
gacggtttccccgggtggcgcagacgccactgggcggtcaagctgatcacctgcttcacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccctaggagtgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgccacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggcggcttcactgagtatgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccaccatctcactcaaaatagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctg
atcgccgagggcctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactcccacctggggcctctgcagatctccctgggacgcatgttgctggac
atcctcaagttcctcttcatctactgcctggtcctgctggccttcgccaatgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgtgagaagcagaacaacgccttctctacgctgtttgagacgttacagtccctgttc
tggtcgatattcggcctgctcaacttgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctatcagctcatcgctgatcatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagttattttgacgagggaggaact
ctccctccgcccttcaacatcgtccccagccccaagtcagtgtggtacctgtgtgtgtgg
acgcacaaccgcctgtgtggacgggaccatcccagtcctgacaacccgaggaaacacgag
aacttaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcag
gaggtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaagaca
gacgagggtctgacagaggagaattttaaggagctcaagcaggacatctccagtttccgc
tatgaggtgttagacctgttgggggacaggaagcctccgcggaggacctactcatccagc
agtgaggctacccagcaggacgaggccaatgaggaagaaggggctggacaggcccagggt
caatctagggaccaaggggctaagggggtatccttcagcacgtctatcgctgagaggaag
aacaaggactctgggttcagcgtctccaccctctttaaatccatgtcaggggcagagggg
gcagtggacaacaaaccaaagtgcaacgggctcaggttctcctcctcccccccgccctct
gctgcgttaacccgcagtagtggccggctgcaacgcttctccaagtccaaaagagactcc
atcaggcggctgggcctgctcttctcccgcatgaacggacacgtcccagagcccaggtcc
cctcctcccaggatgcaccagcccacctacagcatctcaggcggtctgcttcggcagccc
acaacctggccggacatccagatcccccccaatcccccggttacacacagcctgttccac
ctgggggtgaacctgaacgagctaccacatgcccctccccaggccctgccattggggtca
ccccagcaggctaacggaagtgacagtctgctccttcgacccgcgggccactccttacca
ccgccaggccactccctgcactgtgcttccagcatcacggcctccagctcccgggctgtc
ctcctgggctctagtgaggacatgtttgagggctggataggaccttgtgacgagctggac
tcctctgagggggggtctgagcaagaggaatccatcacaacacagctttag
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