Oncorhynchus gorbuscha (pink salmon): 124006051
Help
Entry
124006051 CDS
T07892
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124006051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124006051
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124006051
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_15th
Ig_NUP210_16th
Ig_NUP210_7th
Ig_NUP210_3rd
Ig_NUP210_4th
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_8th
Ig_NUP210_6th
Big_2
Ig_NUP210_14th
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
124006051
NCBI-ProteinID:
XP_046171669
LinkDB
All DBs
Position
LG19:3281456..3342166
Genome browser
AA seq
1888 aa
AA seq
DB search
MAVLNSKVLCKLLIFSVTIIALSQSTRLNVPKLLLPRSNHNHVNFTLTAEKGCYKWVSSR
PQAVVVWPLSPSIPPSILPPSACSQQVLVSAQPLSAPLDTNRGASIIRGQDSVTGHTLRC
DVIVDQIKQIQVVTTTRQLFTEDPPIVLSVMALDSGGNTFSSLAGLQFEWKLVKDTETAE
IVRFVRFSEAGYSPPHHILSLEEAGQKGDSVLLEGVRSGVVQVRASLSHPDYKWVEPASV
SLTVTDRLYLSPSHDAYLLLGSTLSFRVWKSVHDTETEVLLGEGEYELSVERDPNNDDDV
ITVDQDTGTVTARGLGRTTLSVTHPSLPENSASHLPRCSVFVVEPNYLTLGVEEEDRWVL
ESGRQYQVTVRVHDQEGHTAHLAQNVVMTVDFSDWLFYVLETSSNSSYHVLETRGAGHTT
IRAALFTVLTEDGRALPLIPPIRAEQDVEIYEPLTLQPRLLVFPWQPEGQLYQHHLQVEG
GSGAVSWSVSDSDVAVVTVKGEVMAGKRRGQVDIQASDARNPLHTATGQVYVLRPAGVDV
LAQRGDCSVGETITLPLAVWGVQEEETQDPPQGSSGPQTLLEVTDCSLINLHVTTSPQGV
FTPLPGSVGPGSGFCGGLQLEAVGPGHTLITITVEMEHYNITSMATLAAHSPLKALVSEV
VLSLGASCLVVFEGGPQPWPLVPARFHGDAQAEGEGLSVEALSLSEPRRAQQHTYRVTCH
ALGEQWLVFSSGNSPGPLNQDPSVERSRVRVDCSAPGSLSLSLLPSFPPSIPPSSLSHPC
PEPHYPASLLSVSSSRDAVLQLAVFDHRGVQFDNFSSCSVNWLTSNYSLLSLPSHTHMGL
ADTHTPSGHSKLHGRQVLRAHDLTGTVTITVALTPAQDSWATPLTASVHLRLVEDVLWDK
RAITLYNHPDVTENLTLVQGSGHFLVRLQDRELANITYLENSNVVQVSPLRPGLSSILAY
DLCLTSADPAVTSISISDITDFQIDFVDIVEVDHSALVRVRVLDSNRQPFLHRYLPLMHL
KLTPSSPILTVEPAGPLDSVSVGYRVSGHTVGVVSLHLSAVDSSGSVRTSSHKQLQVYPR
FTLQPRSLALTLGSVGQVKWEGGPHPQSSVGFSVSDSRIATVTETGLVRGVAVGMVKLRG
ALQTVTQDTGALLTFAQDEVDVEVFNLTGVRIQSPLVKLSVGTEMPVYVMGSDSSQNPFA
LGSVESGLSFHWNLGKLGVLEIQTRHTQAGVTVSPAHSFSVLVRAWAAGRTSLRVTVQLA
NHTSASHQQLSDEIQILVYQEMQLAVGTSRSILMSPYSHYALLSNKDAICPVRYALCQCV
KGEGLVTVDSQGVLRAGPDTGSALLEVIAMETCGVNQTLLISVRVSPVWFVRLFSVSSLY
SVGGGGLPAFPLGWTIRVRALCYDNLGQQFNAHNTLTHITTNRDDLVQVTPDSDSHSFVV
QTVSGGLTVLGVQADPINPSLSDYTPLPVLPAISAPPHTLRPGDTLCFNTPLTGPQGQPG
QWNVSSSRVLQIDPKTGAALAKHSGTVVVYYRLEGGQQALREVKVDSPVIPELSPPDDRF
LTNWPDAADYTVPVELYTSHFNTAQCSLSQKEAIEKKLQPEAELRCFLHFSAPYLQLNTL
QAVMVTTPHYDLDTGEYSCRVSVRPQSDSVLHLLSSLSVSVSLSASLRGQSPVPVLPLSA
LSLPLSGRLVQLLYLPAFHCPVSFLVLSALHPMAEFSVLGTKEVLSALRFHSDSTDVLLS
EPSQSDGHLVLSVYISTSWVKSQALPPPANITLSSHLTPQTHVLTVYITVDSEVKIGSTD
LIRLQSSWTQLLDFHLILVFAVFAVMATTATLYIVYNSCMQTVPVPVVGLYPNTLECSRT
VHFSPWIRPSSPDTERIIRRRNWLWSTR
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggccgttttaaactctaaagtattatgtaaattattgatttttagtgtaactattatt
gctttgagtcagtcgacaaggctgaatgttcccaagttacttttgcccagatcaaatcat
aatcatgtcaacttcacgttgacagcagagaagggatgctataaatgggtgtcctcccga
ccccaggcagtcgttgtttggcccctctctccttccatccctccctccattctcccgcca
tcagcctgtagccagcaggttctagtgtccgcccagcctctgtccgctccactggacact
aaccgaggggccagcatcatacggggacaggactctgtgactggccataccctgcgctgt
gatgtcattgttgaccagatcaagcagattcaggttgtcacgacgacacgtcaactgttc
accgaggacccacccatcgtgctctccgtcatggcactggactcaggaggcaacacattc
agtagtctggcaggtctacagtttgagtggaagctagtaaaggacacagagacagcagag
attgttaggtttgtgcgtttctcagaggcgggctactccccgccccatcacatcctgtcc
ctggaggaagcaggtcagaaaggggacagtgtgttgctggagggggtccgtagcggtgtg
gtacaggtcagggcctccctctcgcacccagactacaagtgggtagagccggcctctgtg
agcctgaccgtgacagacagactctaccttagcccctcccatgatgcctacctgctgcta
ggctccacgctctccttcagagtctggaaaagcgtacatgacacagaaacggaggtgctg
ctgggtgagggagagtatgagttgtctgtagagagagacccaaataacgatgatgatgtc
atcactgtggaccaggacacagggaccgtcaccgcccgagggctaggccgcaccacgctg
tccgtcacacaccccagcctaccagaaaactctgcttcccacctgcctcgctgttctgtg
tttgtggtggagccaaattacctgacactaggtgtggaggaggaggacaggtgggtgttg
gagagtggtcgtcagtaccaggtgactgtacgagttcacgaccaggagggtcatacagca
cacctggcacagaatgtggtgatgaccgtggacttctctgattggctgttctatgtcctg
gagacttcctctaacagttcctaccatgtactagaaacacgaggggctgggcacactacc
atacgagctgcactgttcactgtgctcactgaggatggccgcgcgttgcccctgatacca
ccaatcagagcagagcaagacgttgagatctacgagcccctcaccctgcagccccgccta
ctagtgtttccttggcaacctgagggacagctctatcagcaccacttgcaggtagagggt
ggcagtggtgctgtgagctggtcggtgagtgacagtgatgttgccgtggtgacagtaaaa
ggggaagtcatggcgggaaagagaaggggccaagtggatatccaggcatcagacgcacgc
aaccctctacacaccgctactggacaggtgtacgtgttgaggccagctggtgtggatgtc
ctggcccagagaggtgactgtagtgtgggagagaccatcacccttcccctggctgtctgg
ggggtccaagaggaggagacccaggaccctccccagggaagctctggcccccagaccctg
ctggaggtgacagactgctctctcatcaacctccacgtcaccacgtcaccacagggggta
ttcacccctctaccaggttctgtgggtccaggctcagggttctgtggaggacttcagctg
gaagcagtgggaccaggccacaccctcatcactatcaccgtggaaatggaacactacaac
atcacttccatggcaacgctggccgcccacagtcccctcaaggccctggtttcagaggtg
gtcttgtctttgggtgcgtcttgccttgttgtcttcgagggggggccacagccctggccc
ctggtccctgcacgtttccatggcgatgcccaggctgagggagaggggctgagcgtggag
gctctcagcctatcagagcccaggagagcccagcagcacacctacagggtcacctgccac
gccctgggggaacagtggctggtgttcagcagtgggaactccccaggtcctctgaaccag
gatccctcagtagagcggagcagagtgagagtagactgcagcgccccgggttctctctct
ctctccctcctcccctcctttcctccctccatccctccatcctccctgtcccacccgtgc
cctgagccccactatcctgccagtctgttgtctgtgtccagtagcagggatgctgtgctg
cagttagcagtgtttgaccaccggggggtgcagtttgacaacttcagctcgtgctcagtg
aactggctgacctctaactactccctgctgtccttgccctcacacacacacatgggcctg
gcagacacacacacacccagcggccacagcaaactgcacggtcgtcaggtgctccgcgcc
cacgatctaacagggacagtcaccatcactgtggccctcacacctgcacaggactcatgg
gcaacaccgctgactgcgtctgtgcatctgagactggtggaggacgtgctgtgggacaaa
cgtgctataaccctctataaccaccctgacgtcactgagaacctgacattggttcagggt
tcaggacacttcttggttcgtcttcaggacagagagctggccaacatcacttacctggag
aacagcaatgttgtacaggtgtctcccctgcggcccggcctctcctccatcctggcctat
gacctgtgtttgacctctgctgaccctgccgtgacctccatctccatttctgacatcact
gacttccagatagactttgttgacattgtggaggtggaccacagtgctctggttcgtgtg
cgtgttctagactctaacaggcaaccgttcctacatcgttaccttcctctgatgcacctc
aaactgaccccctcctcacccatcctcactgtggagcctgcagggccgttggacagcgtc
tccgtaggttaccgtgtgtcgggtcatacagtgggagtggtcagtcttcacctgtctgca
gtggacagcagtgggagtgtccggacttcctctcacaaacagctacaggtctaccccaga
ttcactctgcagccacgaagtctggcactgacactgggcagcgtaggacaggtgaagtgg
gagggtggcccccacccccagtccagtgtgggcttctctgtgagtgacagccgcatcgcc
acggtgaccgagacaggattggtccgtggagtggcagtgggcatggtcaaactcagaggg
gcattgcagaccgtcactcaggacaccggagctctgctcaccttcgcacaggatgaggtg
gatgtggaggtgtttaacctgacaggggtcaggatccagagccctctggtcaaactgtct
gtgggcactgagatgccagtgtatgtgatgggcagtgacagtagtcagaacccctttgct
ctgggcagtgtagagtctggtctctccttccactggaatctgggcaagcttggagtactg
gagatacaaacccgacacactcaggcgggggtgactgtctctcctgcccatagtttctct
gtgctggtgagggcatgggcagcgggcaggaccagtttgagagtgacagttcagctggcc
aatcacacgtcagcctcccaccagcagctttctgacgagatacagatactggtataccag
gagatgcagctggctgtaggaacctccagatccatcctcatgtctccctactcacactac
gcactactgagcaacaaagacgctatctgtcctgtgcggtacgccctgtgtcagtgtgtg
aaaggggagggtcttgtaacggtggacagccagggagttctgagggcggggcctgacacg
ggatccgccctgctggaggtcatcgctatggagacctgtggggtcaaccagaccctgctc
atcagcgtccgggtgtctccagtgtggtttgtcaggctattcagtgtgtccagcctgtac
agtgttggagggggaggcctgcctgcctttcccctgggctggaccatcagagtcagggct
ctctgctacgacaacctgggacaacaattcaacgcccataacaccctcacacacattacc
accaacagggatgacttggtgcaggtgactccagactcagacagtcattcctttgtggtc
cagacagtgtctgggggtttgacagttctaggggtgcaggcagaccccatcaacccctcc
ctgagtgactacacccccctccctgtcctccccgccatctctgcccccccacacacactc
aggcccggagacacactctgcttcaacacccccctgacaggaccgcaaggccagccaggt
cagtggaacgtgtcgtctagtcgtgttctgcagatcgacccaaagacaggagctgctctg
gcaaagcattctgggacggtagtggtctactacagactggaaggtggacagcaggccctc
agagaggtaaaggtggactctccagtcatcccagaactctctcctcctgatgatcgtttc
ctcaccaactggcctgacgcagctgactacacggttcctgtggagctatacacctcccac
ttcaacacagcccagtgttccctgtcccagaaggaggccatagagaagaagctgcagcca
gaggcagagttacggtgtttcctgcatttcagcgccccctacctccagctcaacacgctg
caggctgtgatggtcaccacgcctcactatgaccttgacacaggtgaatacagctgcaga
gtctctgtccgtccccagtcagactccgtcctccacctcctctcctccctctctgtctcc
gtctctctctcagcctctctgcggggccagtcccccgtccctgtcctccctctctctgct
ctgtcgctacctctctccggacgtttggtacagttgctgtacctgcctgcgttccactgc
ccagtgtctttcctggtgctatctgctctgcatcccatggcagagttctctgtgctgggc
accaaggaggtgctctctgccctacggttccactctgacagtactgacgtgctgctatct
gagcccagtcaatcagacggacatctggtgttgtctgtatacatttccacttcctgggtc
aaaagtcaggctctgccccctcctgccaacatcaccctctccagccacctgaccccacag
actcatgtccttacagtttacatcacggtggacagcgaggtgaagataggttccacagat
ctgattcgtctacaatcttcctggactcagctcctggacttccatctcatcctggtcttt
gctgtgtttgcagttatggccactactgccaccttatacatagtgtataactcctgcatg
cagacggttcctgtcccggtggtcggcctgtacccaaacacattggaatgcagcaggacg
gtgcatttctctccctggatcagaccctcgtctccagacacagaaaggatcatccgccga
cgcaactggctctggagcacacggtga
DBGET
integrated database retrieval system
