Oncorhynchus gorbuscha (pink salmon): 124006115
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Entry
124006115 CDS
T07892
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04060
Cytokine-cytokine receptor interaction
ogo04150
mTOR signaling pathway
ogo04210
Apoptosis
ogo04217
Necroptosis
ogo04350
TGF-beta signaling pathway
ogo04620
Toll-like receptor signaling pathway
ogo04621
NOD-like receptor signaling pathway
ogo04622
RIG-I-like receptor signaling pathway
ogo04625
C-type lectin receptor signaling pathway
ogo04920
Adipocytokine signaling pathway
ogo05132
Salmonella infection
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124006115
04350 TGF-beta signaling pathway
124006115
04150 mTOR signaling pathway
124006115
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124006115
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124006115
04217 Necroptosis
124006115
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124006115
04621 NOD-like receptor signaling pathway
124006115
04622 RIG-I-like receptor signaling pathway
124006115
04625 C-type lectin receptor signaling pathway
124006115
09152 Endocrine system
04920 Adipocytokine signaling pathway
124006115
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124006115
09171 Infectious disease: bacterial
05132 Salmonella infection
124006115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ogo04052
]
124006115
00536 Glycosaminoglycan binding proteins [BR:
ogo00536
]
124006115
Cytokines and neuropeptides [BR:
ogo04052
]
Cytokines
Tumor necrosis fators
124006115
Glycosaminoglycan binding proteins [BR:
ogo00536
]
Heparan sulfate / Heparin
Cytokines
124006115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
124006115
NCBI-ProteinID:
XP_046171858
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All DBs
Position
LG19:22392442..22403514
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AA seq
255 aa
AA seq
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MEGYAMTPEDMERGLENSLVDSGPVYKTTVTAVAERKASRGWLWRLCGVLLIAALCAAAA
LLFAWCQHGRLATMQDGMEPQLEIFIGAKDTHNTLKQIAGNAKAAIHLEGEYNPNLTTDT
VQWRKDDGQAFSQGGFKLQGNQIIIPHTGLFFVYSQASFRVKCNGPGERTTPLSHVIWRY
SDSIGVKGNLLSGVRSVCQQNYGNAESNIGEGWYNAVYLSAVFQLNEGDKLWTETNRLTD
VEPEQGKNFFGVFAL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtatgcgatgacacctgaagacatggagaggggccttgaaaatagccttgtg
gacagtggccctgtgtacaagacaacagtgacagctgtcgctgagagaaaggcctccagg
ggttggctatggaggctgtgtggcgttctcttaatagcagctttatgtgcggcagcagcc
ctgctctttgcctggtgtcagcatggaagactggcaacgatgcaggacggaatggagcct
cagctggagatattcattggtgcaaaagatacccacaatacattgaagcagattgccggc
aatgcaaaagcagccatccatttagagggtgaatacaatcctaatcttaccactgacaca
gtgcagtggagaaaggatgacggccaggccttttcccagggcgggttcaagctacaaggg
aaccaaatcatcatcccacacactgggctcttcttcgtttacagccaggcttcgtttagg
gtcaagtgcaacggcccaggcgagcgtaccactcctctgagtcacgttatttggcgctat
tcggactccattggggttaagggtaatctacttagcggggtaaggtcagtttgtcaacaa
aactacggtaatgctgagtccaatattggcgaaggctggtataatgcagtttaccttagt
gcggtgtttcagctgaatgaaggggacaaactgtggactgagaccaatcgactgaccgac
gtggagccagagcagggcaagaacttctttggtgtgtttgcactatga
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integrated database retrieval system