Oncorhynchus gorbuscha (pink salmon): 124007486
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Entry
124007486 CDS
T07892
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124007486
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124007486
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124007486
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124007486
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Nup88
Motif
Other DBs
NCBI-GeneID:
124007486
NCBI-ProteinID:
XP_046174053
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All DBs
Position
LG20:30684380..30725314
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AA seq
1059 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRPSGEKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDYLSEELDPKDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRHHWAVKLVTCFTIGLLFPIFSLVYLLAPRSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKLVAYFKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTYNRLCGGDQPSPDELRKQENLKEFTERHADNLIQNQHYQ
EVIRNLVKRHVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSS
SEATQQDEANNEGEGGAGQGPSRDQGAKGVSFSTSTAERKSKDSGFSVSALFKSMSGVEG
PVDNKPKCNGLRFSSSSPSFAVFSRTGGQLQRFSKSKRDSIRRLGLLFSRMNGHVPEHRA
APPCMHQPTYSISDGLLHQPTTWPDVHIAPDPQVTCSQFHLDRLGVNLKELPQAQAQAPP
LAPAPTQGSPQQANGSDSLLLRPPSLSLPPLGPSLPPPGLSLPHLHCASGIRASSIRASS
SQAVLLGSSEDMYESWIGPCDELDSSEWWAEQDSITTQL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgctgcagatcgtgcgggcggaagcagagctgtcagcggaggagcgggcgtac
ctgacggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtaaactgcctggacccgctggggcgcagcgctctgctcatc
gccatcgagaacgaaaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtg
ggcgacgcgctgctctacgccatccgcaaggaggtggtgggtgccgtggaactgctgctg
tcccaccgcaggcccagtggagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactacgag
atcatcaaactgctggtccagcgcaaagtcaccatcccccggccacaccagatccgctgt
gactgcgtggcgtgcgtgtccagctccgaggtggacagcctgcgccactcccgctcccgc
ctcaatgtctacaagaccctagccagcccgtccctcattgccctgtccagcgaagacccc
atcctaaccgccttccgcctgggctgggagctgaaagaactgagcaaggtggagaacgag
ttccgccaggagtacgaggagctgtcccaacagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctccagagagctggagaccatcctcaaccaccgggactacctcagt
gaggagctggacccaaaggactgccgcgatctggccaagctcaaactggccatcaagtac
caccagaaagagtttgtgtcccagccaaactgccagcagctcctggccaccctgtggtac
gacggtttccctgggtggcgcagacaccactgggcggtcaagctggtcacctgctttacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccctaggagtgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgccacccaccgtggtagagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggatggcggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccactatctcactaaaactagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccaacactg
atagccgaggccctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactctcacctgggacctctgcagatctccctgggacgcatgttgctggac
atcctgaagttcctcttcatctactgcctggtgctgctggcttttgccaacgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgtgagaagcagaacaacgccttctctacgctgtttgagacgctgcagtccctgttc
tggtccatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaataattcctatcagctcatcgctgaccatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagttatttcgacgagggaggaact
ctcccgccgcccttcaacattgtccccagccccaagtcagtgtggtacctgtgtgtgtgg
acgtacaaccgcctgtgtggaggggaccagcccagccctgacgaactgaggaaacaagag
aacttaaaggagttcacggagcgtcatgctgacaacctgattcagaaccagcactatcag
gaggtgatcaggaacctggtaaagaggcatgtagcagccatgatccgcagtgctaagaca
gacgagggactgactgaggagaattttaaggagctgaagcaggacatctccagtttccgc
tatgaggtgttggatctgctggggaacaggaagcccccgcggagaacctattcatccagc
agtgaggccactcagcaggatgaggccaacaatgagggggagggaggggccggacagggt
ccctccagggaccaaggggccaagggggtgtccttcagcacgtcaaccgctgagaggaag
agcaaggactctgggttcagtgtctctgccctctttaagtccatgtcaggggtggagggg
ccagtggacaacaaaccaaagtgcaacgggctgcggttctcctcctcctccccttcattt
gctgtgttcagccgcactggtggccagctgcagcgcttctccaagtccaagagagactcc
atcaggcggctgggtctgctcttctcccgcatgaatggacacgtcccagagcacagggcc
gctcctccctgcatgcaccagcccacctacagcatctcagatggcctacttcatcagccc
acaacctggccggacgtccatatcgcccccgatccccaggttacatgcagccagtttcac
ctggaccggctgggggtgaacctgaaagagctaccccaggcccaggcccaggccccaccc
ctggccccagcccctacccagggttcaccccagcaggctaacggaagtgacagcctgctc
ctacggcccccgagcctctctctgccgcccctgggcccctccctaccgcccccgggcctc
tccctgccacacctgcactgtgcttctggcatcagggcctccagcatcagggcctccagc
tcccaggctgtcctcctgggctctagtgaggacatgtatgagtcctggataggaccatgt
gatgagctggactcttcagagtggtgggctgagcaggactccatcaccacacagctttag
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