Oncorhynchus gorbuscha (pink salmon): 124007711
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Entry
124007711 CDS
T07892
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ogo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
124007711
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124007711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124007711
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Nectin family
124007711
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
Ig_2
C2-set_2
TMEM154
Protocadherin
DUF7237
EphA2_TM
DUF6769
DUF5305
EzrA
Motif
Other DBs
NCBI-GeneID:
124007711
NCBI-ProteinID:
XP_046174381
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Position
LG21:21224012..21250330
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AA seq
501 aa
AA seq
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MLSGNWTNVTTNSSIRIDHKPLSPDLSRRADHSTEPGRMTPLLWILWSFIAMVQGDFVEP
SPSYTLESLAEAETRLPCQFKVEVGQVVVQVTWTKEKADGTKDQIITVHHTDGHTEFGQY
SGRVRFSSRTPTVDSSLIIMNTVESDEGRYNCHISTFPSGNFERQLSLTVWTTPISSLDP
VILVEGQSFQLAASCRSVARPPPHLSWDTELPGQSHNRSLEGGSVSTHFSLHPLRSMDGK
RLDCLVTHPALKGPRRITNNLVVHYPPNAEISGFDQNWYAGLEEAALSCVSGGNPKPQSF
NWTRKGGDLPEGVTTGNGSLLFNRPLILTDAGIYQCVAMNSVGADNAEVEITVTELPQKQ
ASFDSLLMVIVGGVAGVLLLVMIIIVISVTRHHKHKNKKLSRELTVRKEEISTLSRQASF
RKMNSVSMDTRGQTEEEIPLRMEGTLRTSLSSVVEQGRIRESRSTLVGSGGARLPGSTCS
VQFFTKREGEQSHGQRGGEQT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtggaaattggaccaatgtcacaacaaattccagcatcagaatagaccacaaa
cctctgtctccagatctatcaaggcgggcggaccactccaccgaaccggggagaatgaca
ccactgctgtggatcctttggagtttcatcgctatggtgcagggggactttgtggagccc
tctccctcgtacaccttggaatccctggctgaggctgagacccggctgccctgccagttc
aaggtggaagtgggccaggtggtggttcaggtcacctggaccaaggagaaagcagatggc
accaaggaccagatcatcacagtacaccacaccgacggacacacagagtttggtcagtac
tcagggcgtgtgcggttcagcagcaggacacccaccgtggactcatccctgatcatcatg
aacaccgttgagtcagatgaaggcaggtacaactgtcacatcagcaccttcccctcgggg
aacttcgaacgacagctgtcactcaccgtgtggaccacgcccatctcctccctggaccct
gtgatccttgtcgaaggccagtccttccaattggctgcatcctgccgctctgtggcccgc
cctccgccccacctctcctgggacacagaactaccaggccaatcacacaacaggagtttg
gagggtggttcagtctccacccacttctctctgcatcccctgaggagtatggatgggaag
aggctggactgtctggtgacgcacccggctctgaagggaccacgcaggatcaccaacaac
ctggtggtgcactatcctcccaatgcagagatctctggttttgatcagaactggtatgct
ggtctggaggaagctgccctcagttgtgtcagtggaggaaaccccaaaccacagagtttc
aattggaccagaaagggcggagacttaccagagggcgtgaccacagggaatggatccttg
ctgtttaataggcccctcatcctgacggacgctggcatctaccaatgtgtggccatgaac
tctgtgggggcggataacgcagaggtggagatcactgtgacagagttgcctcagaagcag
gcgtcgttcgacagtctcctgatggtaatagtgggaggagtggccggagtactgcttcta
gtcatgatcatcatcgtcatctctgtgacccgtcaccacaaacacaagaacaagaaactg
tcgagggaactcactgtgaggaaggaggagatcagtactctctccagacaggcatctttc
aggaaaatgaactcagtcagtatggacactagaggacagacagaggaggaaatccctctc
agaatggaggggacactgcggaccagtctgtcctccgtagtggagcaagggcgcattagg
gagagtcgatctactctggtagggagcgggggggctagactacctgggtcgacctgttct
gtacaattcttcacgaagagggagggagagcagagccatggacagagaggaggagaacag
acttag
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