Oncorhynchus gorbuscha (pink salmon): 124008454
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Entry
124008454 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124008454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124008454
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124008454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
124008454
NCBI-ProteinID:
XP_046175702
LinkDB
All DBs
Position
LG21:46910353..47000710
Genome browser
AA seq
1531 aa
AA seq
DB search
MSGMETSAPTTTEKKGSGLDGNGFTDLPKKLSPSAVTRAPHHVFPTFHTPIPIDMRHHEG
RYLYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPHMEHYLRS
IHSSPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASHRNPYGEL
LMQGGGAAAAHLPDYITPMDASRFSSPRLTPRLNRKRALSIXPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPP
LIQPPPTFSSRQSALGLSSLPPASHNHNNGSQSKNTSGDSAVSSTVNPMITKRSKVKTEV
ECPRPLSPCSPDHLGGMLDMKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQEQLVHHI
NNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLE
NLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDP
SSLRKHVKTVHGPEAHVTKKQRSDLPPSRPMPPKENGENETGRGMEEKMDSTSRGTEDYL
QATSIKTENSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSSGGSMGDLTGLDDP
SGPLMDSSFSGLWSGTAGVGVGLHLRQHLGLSHIHRLEHLKKEKLKTVRDSCQWANHHPS
PPVQNTKLPPIPVSGSLLERGNMDGGPGSFLSLSELCSSKVTVLDQLDHLMERRDSATST
VSSAYISRRSSGISPLHYSRRSSDASTFSGHRHHNISSTGSYDPISTDLSRRSSNASQSG
GGGGLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCMALYRDASQGDSSS
GYSSFNPIAPSGVPRRCSGDMGGYNGRSMMPHEAPSNIPRRASDPVPRPPPLDPQSHQPQ
VQRYNSTGNMQNLHPHASQPNQALSAAERRHLAPQSHQPRSDSSLQRYPYCPRPPSISEN
VAMETMAGDMSGSRNNSEEEMMVLPDDVVHYITSQGGAGESDCANGYNRQAQCGFHGNTI
NPNPQQQQQFYHQQRMAVVDTNMNMNPLSAPQTMPLFCALSSGHPQQSFPSLPSKTSTMP
VQWNEVSSGTVEALHNPRQQLAFGRSNPNLAMVQQKQNIVSFQNQNLNSNQHIAQMIHNL
AHAAQQGRYIELQKADSRLSCVQQQSLQQQQPANANLNEPVSLGHGFNQGLGPSDATANA
NQRSSCSSMAVGGTLGMLSQNSKQQQTVHPVDMKQNSRLEAQPGGSQSSQVTFKDSGVNS
SRMISQKYTIASQVQYPIQNGGQILLQPRPPTEPKSLSRQHSGSMTMQRQNSIGNHCSNG
NNKDSNVMYYTGQIHVFEPNGNVNMQMMASSVVDDLQCPSDSTETAMTSPGVNNQVSSTV
DSSNGTGAEEPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSLP
LPAGGSNMAIGDMSSLLTALAEENKFLNMMS
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaatggagacctctgccccgacgaccacagagaagaaaggctctggtctggat
ggaaacggcttcactgacctgccgaagaaactctcaccttcagctgtcaccagagccccg
caccacgtcttcccgacgttccacacgcccatcccgattgacatgcgtcaccatgaggga
agatacctctatgaaccacacaccctacatgccatgcatggtcctggactaggtggcagc
ccggtcatgtcagacatctctctgatccgtctgtccccccacgcagccggaacgggggag
tcccccttcagccccgctcacccctacttcaaccctcacatggagcactacctccgctcc
attcacagcagcccaaccctgtccatgatctctgcggcccgcggactcagccctgcagac
ttggcgcatgaacacttgaaagagcggggtctgtttgggttgccccctccccctcctgga
gccagccctgctgagtactaccacctgatggccagccaccgtaacccctacggagagctg
ctgatgcaggggggtggggcggcagctgcacacctgccagactacatcacccccatggat
gcgtcacggttctccagtcccagactgacgcccaggctgaacagaaagcgagccctgtcc
atcntccctctctcggacgccagcatcgacctgcagaccatgatccgtacctcgcccaac
tctctggtggcctacatcaacaactcacgctccagctctgcagccagcagctcctacgga
cacctctctgttggaggcatcagtccgtcctttaccttcccccatcacatcaaccccatg
gcctaccagcagctcctgtcccagcagagaggcctgagtgtgttcggccacacccctcct
ctcatccagcccccacccaccttctccagtcgccagtctgccctgggtctctcctctctg
ccccccgcctcacacaaccacaacaatggttcacagtcaaagaacacaagtggggactcg
gcagtgagcagtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaggtg
gagtgtccgaggccactgtccccatgttctccggatcatctaggtgggatgctggacatg
aaggaggacttggataaagatgaatgcaagcatgagccagagatggtgtatgagaccaac
tgccactgggaaggatgctccaaggagtacgacacgcaggaacaactggtccatcacatc
aataacgaccacatccacggggagaagaaggagtttgtgtgccgctgggatgagtgttcc
agggagcagaagccttttaaggcccagtacatgctggtggttcacatgaggagacacacg
ggggagaagccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctggag
aatctgaagacccacctgcgatctcacactggggaaaaaccatatgtgtgtgaccacgag
ggatgcaacaaagccttctctaacgcctcggacagagccaagcaccagaaccgcacacac
tccaacgagaaaccctacgtgtgtaaagtcccggggtgtacgaagcgctacacggacccc
agctctctcaggaagcacgtgaagacagtccacggaccagaggcccacgtcaccaagaaa
cagcgcagcgacctgccgcccagcagacccatgccacccaaagagaatggagagaacgag
acaggccggggcatggaggagaagatggacagcacctcgagaggtacggaggactacctc
caggccacgtctatcaagacggagaactctgtgatgtatcagtccagccctggtggtcag
tcgtcatgtagcagcgagccgtcgccacttggcagttccaccaaccatgacagtggagta
gagatggccctccacagcagcgggggaagcatgggggacctgactgggctggacgacccc
tcagggcccctcatggactcctccttctctggcctctggtctgggacagcaggggtcggg
gtgggcctccacctccgtcaacacctaggcctcagccacatccacagactagaacacctg
aagaaggagaaactgaagacggtgagggactcctgccagtgggctaatcatcatccatct
cctccagtccagaacaccaagctaccgcccataccagtaagcgggtcccttctggagaga
ggaaatatggatggtggacctggatcgttcctcagcctcagtgagctgtgttccagtaag
gtgactgtcctggaccagctggaccatctgatggagcgcagggacagcgccaccagcacc
gtctcctctgcctacatcagccggcgctcctctggcatctcccccctgcactacagccgc
cgctccagcgacgcctccacgttcagtggccaccgccaccacaacatcagttccaccggc
tcctacgaccccatctctacagacctgtcccggaggtccagcaacgccagccagagtgga
ggagggggagggctgcccagtcacctcagcctcacccccgcccagcactaccacctcaag
gctaaatatgcggcggctacaggcggagccccacccacacctctacccaacatggagagg
atgagtctcaagacctgcatggccctctacagggatgcttcccagggagactcgtcgtct
ggttactcctccttcaaccccattgcccccagtggtgttcccaggcgctgcagcggcgat
atgggaggctataacggccgcagcatgatgccccacgaagctccgtccaacattcctcgt
cgggctagcgaccccgtcccacgaccgccgcccctggacccgcagtcccatcagcctcag
gtacagcgctacaacagcacgggcaacatgcagaatctccacccacacgcctcccagccc
aaccaggccctgtctgcagccgagcggcgccacctggcaccccagagccaccagccgcgc
tccgacagcagtctgcagcgatacccttactgcccccggccgcccagcatctctgagaac
gtggccatggagaccatggccggcgacatgagcggtagtcgcaacaacagtgaggaggag
atgatggtacttccggatgacgtcgttcactacatcacctctcagggcggagctggagag
tcagactgtgccaacgggtacaaccgacaagcacaatgtggtttccatggaaacacaata
aaccctaacccccagcagcaacagcagttttaccaccagcaaaggatggctgtggtggac
accaatatgaatatgaaccccttgtctgcaccacaaaccatgcccctcttctgtgcccta
agctcaggccatccgcagcagtctttcccctccttacccagtaagacgagcaccatgccg
gtgcagtggaacgaggtcagctcaggtactgtggaagctcttcacaacccaaggcaacag
ctggcgttcggtcgaagcaacccaaacctcgccatggtccaacagaaacagaacattgtc
tcattccagaatcagaatcttaactccaaccaacacattgcacagatgatccacaacctg
gctcacgcagcccagcaggggagatacatagagctgcagaaggcggactcgaggctgagc
tgtgtccagcaacagagcctacagcaacagcagcccgctaatgctaacctcaatgaacca
gtgagtctcgggcatgggtttaaccagggtcttggtcctagcgatgctaccgctaacgct
aaccagcggtcctcctgtagtagtatggcagttggtggcactctgggtatgttgagccaa
aacagtaaacaacaacagacggtgcaccctgtagacatgaagcagaacagccggctggag
gcgcagccaggggggagtcaatcgtctcaagtcacatttaaggatagcggtgtgaattct
tcacggatgatctcacagaagtatactatagcgtcccaggttcagtatcccatccaaaat
ggaggtcaaatactcctccagccaaggccgcccacagaacctaagtctctaagcagacag
cattcagggtcaatgacaatgcagcgacaaaactcaattggcaatcactgcagcaatggc
aacaacaaggacagcaatgttatgtactacacaggacagatacacgtgtttgagccaaac
gggaacgtcaacatgcagatgatggcatcatcagtagtggacgatcttcaatgtccctca
gacagcactgagaccgccatgacctcaccgggagtaaacaaccaggtctctagtacggtg
gactcgtccaatgggacaggggcagaggagccccagattgactttgacaccatgctggat
gacggggaccactccagcctgatgtcgggcaccatcagccccagtatcctccagagtcta
tcccagacctcctccagactcaccaccccccggaactctgtcaccctgccctccctgccc
ctccctgcagggggaagcaacatggccatcggtgatatgagctccctgctcaccgcgctt
gcagaagagaacaagttcctcaacatgatgtcataa
DBGET
integrated database retrieval system
