Oncorhynchus gorbuscha (pink salmon): 124009222
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Entry
124009222 CDS
T07892
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ogo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
124009222
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124009222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124009222
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Nectin family
124009222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
Protocadherin
RIFIN
He_PIG
TMEM154
Neur_chan_memb
EphA2_TM
DUF6377
V-set_CD47
DUF6249
DAG1
NICE-3
Miga
LapA_dom
Tmemb_9
PRIMA1
Stevor
Orf78
Motif
Other DBs
NCBI-GeneID:
124009222
NCBI-ProteinID:
XP_046176747
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All DBs
Position
LG22:complement(32242239..32277037)
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AA seq
600 aa
AA seq
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MELPVRGRGQSQWGTAWLVLWAFAVCVRGGFVEPPPSFSLRSLTEVETRLPCQFQVQEEE
QVVQVSWFKELPDGTKEQIITAHLTEGHTEFGRYSGRVRFESSSPTVDSALLIMNTEESY
EGKYTCHISTFPYGNFERQLSLTVWTLPISSLDPVVLEEGQSFRIAASCRSVARPPPRLT
WDTDLPGQNQTRSSEGGAVSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFP
PDAAVTGYNGNWYMGLKGAELKCETGGNPKPQSFTWTRGGKALPDGLTVNGARLLFGRAL
RQNDTGVYECVVNNGIGTRKVESNITVTEKIRSVQETTVDTLVMIIIVVAAGVLVIVMII
IIILVNRYHRRKNRKLEMELSERTLKINTLSRQNSSRRLNSVSTDPRGQNEDCTLLRLDS
RMKNSLMSLEDRPIYIGSESSLGGRQGTVGEGDVDYLGRPVLYQSSWHDGRESMRGAEME
GEREERRRRVESYLKRSNMSLDSGLPSSLVPIKPQDQDGSVGPTDIPPMLSDLCGQREGV
TKGEDWGHRRAVLEVDEADCDTSSYQISEALSNHFHYSNGFLRPKPHSNAILLHPRGQII
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagttacctgtccggggccggggccagagccagtggggcacagcgtggttggtgcta
tgggcatttgcagtgtgtgtgaggggtgggtttgtggagcctcctccatccttctccttg
cgttccttgacggaggttgagacgcggctgccctgtcagtttcaagttcaggaggaggag
caggttgttcaggtcagctggttcaaggagctacctgatggcaccaaggaacaaatcatc
actgcccacctcacagagggacacacagagtttgggcgatactctgggagagtgaggttt
gagagcagtagccccacagtggactctgccctgctcatcatgaacacggaggagtcttat
gaggggaaatacacctgtcacatcagcacattcccctatgggaactttgagaggcagctg
tcactcactgtgtggaccctaccaatctcctctctggacccagtggttctggaggagggc
cagtccttccgcatagctgcctcctgccgctccgtggcccgtcctccacctcgactgacc
tgggatacggatctccctggtcagaaccagacccgcagctccgagggcggggccgtgtcc
acccacttctccctgcaccccctgaggagtatgaacggcatgcggctggactgcctcgtc
tggcaccctgctctggagcaaccccggaggatcagtaaccgcctggtggtgcaatttccc
ccagatgcagctgtcactggctataatggaaactggtacatgggactgaagggagctgaa
ctcaagtgtgagactggaggaaaccccaaaccacagagcttcacctggaccaggggtggt
aaggccctgccagacggtctcactgtgaatggagcaaggcttctgtttggccgagccctg
agacagaatgacactggagtttatgaatgtgtggtgaacaacggcattgggacaaggaaa
gtagaatcgaacatcacagtaacagagaaaattcgcagtgtgcaggaaaccactgttgac
actctagtgatgatcattatagttgtggctgctggggttttggtcatcgtcatgatcatc
atcatcatcttagtcaaccgataccacaggcgcaaaaacagaaaattagagatggagctt
agcgaaagaacgttaaaaatcaacacactctccagacagaactcctcccggagactcaac
tctgtcagcacagaccccagaggacagaatgaagactgtacactactcagactagacagt
agaatgaaaaacagcctaatgtccctagaggaccgtcccatatacataggcagtgaatca
tccctgggtgggaggcaggggactgttggagagggggatgtggactacctaggacgccct
gtcctgtaccagtctagctggcatgatggcagagagagtatgaggggcgcggagatggag
ggagagagggaagagcgcagacgaagggtggagtcgtacctgaagagaagcaatatgtcc
ctggactctggccttccttcctcccttgtccccatcaagccccaggaccaggatggcagt
gtggggcccacagacatccccccaatgctcagtgacctgtgtggccagagggagggggtg
accaaaggggaagactggggccacagacgggctgtgctggaggttgatgaggcagactgt
gacaccagttcttaccagatctcagaggcgctctccaaccacttccactacagcaacggg
ttcctgcggcccaaaccacactccaacgccatcctcctacaccccagaggacagatcatc
tag
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