Oncorhynchus gorbuscha (pink salmon): 124010008
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Entry
124010008 CDS
T07892
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124010008 (tcf3a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
124010008 (tcf3a)
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Gene cluster
GFIT
Motif
Pfam:
HLH
SR-25
Motif
Other DBs
NCBI-GeneID:
124010008
NCBI-ProteinID:
XP_046178263
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Position
LG22:complement(37143811..37189861)
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AA seq
652 aa
AA seq
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MATVGTDKELSDLLDFSAMFAPPVLNGKNRPTTLASSQFGGTGMDERSGSTPWASGEQNS
PSFNQGRGYGEGTHYNEHECLASTPMFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRSTQESMDGQPKKIRKVPPGLPSSVYASASGEDYNRDA
AGYPASKPGNVGYPGSFYMQEGLHPSPDPWSSAGPMGQPGYSAVLGNSPHLGQPAPFTAI
NPQDRLKRQPLPLSPQNYPLHGSEVNGSFHPGSAGYGVPNHTPPINGTDSIMANRGTAPP
SSGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWSRGSGQATPSPNFEGG
LQALQNKMEDRLEEAIHVLQRHAGGQGGPGGLTDMHSLLSAGIGGLAQAFNNAGLGLANR
LPNLMANHHEDSAGPPSSGPGLHGHHGPPSAQSGSQPEGFTSLSRSTHSSSGADIKREDK
EDDENSSVADKSEDEKKDSKARTRTRETFSFQTFSSSLSDTGADSSCSVASPSDDNLTAE
EKEKRERERRSANNVRERVRVRDINEAFRELGRMVQVHLRGDKAQTKLIILQQASQVIMG
LEKQVRERNLNPKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVNHM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtggggacagacaaggagctcagcgacctgctggatttcagcgcgatgttt
gcacctccggtgttgaatgggaagaacaggcccaccactctagccagcagccagttcgga
ggcactggtatggatgagcgaagcggttctaccccctgggcatctggagaacagaacagc
ccttccttcaaccagggacggggttatggtgaaggaactcattacaatgagcacgaatgc
ctggcttccacccctatgttcggctcaggaattgtgggcaaagctgagcgaggaccttac
tcttcttttggagcacagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtccccctcgggtctgaagtcaggctcccagttctacccctcccagttcaatcct
cgcaggagatccacccaggagagcatggatggccagccaaaaaagatcaggaaagttccc
cctggcctgccctcttcagtgtatgcgtcagcctcaggagaggactataaccgagacgct
gcagggtatcctgcctccaagcctgggaacgtgggctaccccggctccttctatatgcaa
gaaggtctgcacccctcccctgacccgtggagttctgccgggccgatggggcagccgggc
tactctgctgtgctgggtaactcccctcacctgggccagcccgcccccttcacggccatc
aacccacaggacagactgaagcgccagccgttgccactttcgccccaaaactaccccctg
catggcagcgaggtgaatgggagctttcaccctgggtccgctggctacggagtccccaac
cacaccccccccatcaatggaacagacagcatcatggccaaccggggaacagctccacct
agctcaggagatgagatcggcaaagccctggcatcaatttatccttcggaccacaacagc
aacaccttcccttcatctccatctactccagtgggctctccccaggccatagcaggttct
gcctctcagtggtcccggggctcaggacaggccacaccctctccaaactttgagggagga
ctgcaggctctgcaaaacaaaatggaggaccgtctggaggaggcaatacacgttctgcag
cgccacgccgggggacaggggggtccaggggggctgactgacatgcacagcctcctcagc
gctgggatagggggtcttgcccaggccttcaacaacgctggcctgggactggccaacaga
ctgcccaaccttatggccaaccaccatgaggactctgctggtccgccctctagtggtcct
ggtctgcatggtcaccatggccctccctcagcccagtctggcagccagcctgagggcttc
accagcctctctcgctccacacactcgtccagtggcgccgacatcaaaagggaggacaag
gaggatgacgagaactcctccgtggctgacaagtcagaggacgagaagaaagactcgaag
gctcgcacccgaacaagagagacgttctccttccagaccttctcttcctccctatcagac
acgggagcagacagcagctgcagcgtggcctcgcccagcgacgacaacctgactgcagag
gagaaggagaagcgtgagcgggagcgccgctcggccaacaacgtccgggagagggtgcgc
gtgcgcgacattaacgaggcgttcagggagctgggccggatggtgcaggtgcacctgcgc
ggcgacaaggcccagaccaaactcatcatcctgcagcaggcctcgcaggtcattatgggc
ctggagaagcaggtccgagagcgtaacctgaaccccaaggcagcgtgtctgaagcggagg
gaggaggagaaggtttcgggggtggacccccagatgcagatgggaggggggcaccccggg
ttaggcggcgatggacacaactctgtgaaccatatgtaa
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integrated database retrieval system
