Oncorhynchus gorbuscha (pink salmon): 124011211
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Entry
124011211 CDS
T07892
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124011211
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124011211
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
124011211
NCBI-ProteinID:
XP_046180299
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Position
LG23:47097724..47170667
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AA seq
836 aa
AA seq
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MTGAREKGRRPAMRGPAFMFNDHTTSMTAEEERFLDAAEYGNIPVVRKMLEESTTLNVNC
VDYMGQNALQLAVGNEHLEVMELLLRRDNLARIGDALLLAISKGYVRIVEAILAHPSFQA
SERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLLKGARIERPHD
YFCKCPECTEKQGKDAFSHSRLRINAYRGLASPAYLSLSSEDPVLTALELSNELTKLANI
EKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVTAEKEAGKGLRSLLSRVKLA
IKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIVVKCLVVVAVAFGLPLLAMGYWFAPC
SRLGNVLRSPFMKFVAHAASFIIFLCLLLFNASDRFQGISTMPNVTVTDYPMQIYRVKTT
EFSWTEMLIMVWVTGMMWSECKELWTEGPREYMQQLWNVLDFGMLSIFIAAFTARFFAFL
QATRAQQYVNEKIHTTDLSLVTLPPEVKYFTYARDKWLPSDPQLISEGLYAIAVVLSFTR
IAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKVNPAFT
TVEESFKTLFWSIFGLSEVSSVVLKYNHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINS
SYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIVPTPKSFYHHIRWIVGMLHCRQR
SVKKDLELGLDSSKSRLNLFTQSNLRIAESHSILKQPTCYQQIMKRLIKRYVLKAQVDKE
NDEVNEGELKEIKQDISSLRYELLEDKSQATEELSLLIQKLSDKLNLGPTTRLPYK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggcgcgggagaagggtcgtcgaccagcgatgcgtgggccggccttcatgttc
aacgaccacaccaccagcatgaccgccgaggaggagcgctttctggacgccgccgagtat
ggcaacatccctgtggtccgcaagatgctggaggagtccaccacgctcaatgtcaactgt
gtggactacatgggccagaatgcattgcagcttgcggtgggcaacgagcatctggaggtg
atggaactgctcttgcggagggacaacctggcacgcatcggtgacgccttactcctggct
atctcaaaagggtatgttaggatcgtggaagccatcttggcccatccatccttccaagcc
agcgagcggctgacgcggagtccgtgtgagctgcaggacgatgacttctactcgtatgac
gaggatggcacacgcttctcgcccgacatcacccccatcattctggctgcacactgccag
aagtacgaagtggtacacatgctgctgttgaagggcgctcgcattgagcggccacatgac
tacttttgcaagtgcccagaatgcaccgagaaacagggcaaagacgctttcagccactca
cgtttgcgcatcaatgcctaccggggcctggctagcccggcatacctttcgctgtctagc
gaggacccggtgctcaccgcgctggagctcagcaatgaactgaccaagttggccaacatc
gagaaggagttcaagaatgactaccggaagctgtctatgcagtgtaaggactttgtagtg
ggagtgctggacctctgtcgggacacggaggaagtggaagccattttgaatggagatgtt
actgctgagaaggaggcggggaagggccttcgctctctcctgagcagggtcaaactggcc
atcaagtacgaggtgaaaaagtttgtggcccaccccaactgccagcagcaactgctgacg
atctggtatgagaacctgtcgggcctgagggagcagaccatcgttgtgaagtgcctggtg
gtggtggcggtggcctttggtctgcccctactggccatgggctattggttcgctccatgc
agtcggctgggaaatgtcctgcgcagccccttcatgaagtttgtggcccatgccgcgtcc
ttcatcatcttcctgtgcctgctgttgttcaacgcatcggaccgctttcagggcatcagc
accatgccaaacgtgaccgtcactgactaccccatgcagatctaccgggtcaagaccacc
gaattcagctggaccgagatgctcatcatggtctgggtcacagggatgatgtggtcggag
tgtaaggagctgtggaccgaggggcccagggagtacatgcagcagctgtggaacgttctg
gacttcggcatgctttccatcttcattgccgctttcaccgctcggttctttgccttcctc
caggccaccagagcccagcagtacgtcaacgaaaagatccacaccaccgacctctcccta
gtgaccctacccccggaggtcaaatactttacctacgcaagggacaagtggctgccgtca
gacccccagctgatctcagaagggctgtacgccatcgctgtggtgctgagcttcacacgc
atcgcttacattctgccggctaatgagagctttggaccactccagatctccctgggccgc
acggtcaaagacatcttcaagttcatggtcctgttcatcatggtcttcctggcgttcatg
atcggcatgttcatcctctattcttactacttgggtgccaaggtcaacccggccttcacc
acggtggaggagagcttcaagactctgttctggtctatatttggactgtccgaggtgtcc
tctgtggtgctcaagtacaaccacaagttcatcgagaacatcggctatgtgctctatgga
atctacaacgtgaccatggtggtggtgttgctcaacatgctgatcgccatgatcaacagc
tcctatcaagaaatcgaggacgatgcggacgtggagtggaagtttgcacgctccaagcta
tggctgtcgtactttgacaacggcaagacactgcctcctcccttcagcatcgttcccact
cccaagtccttctaccaccacatcaggtggatagtcggcatgctgcattgccgacaaagg
agtgtgaagaaggatctagagctggggttggacagttcaaagtccaggctcaatctcttc
acccagtccaacctacgcattgcagagtcccacagcattctgaaacaacccacctgctat
cagcaaatcatgaagcgactcatcaaacgctacgttttgaaagcacaggtggacaaagaa
aacgacgaggtcaatgaaggtgaactgaaagaaatcaagcaggacatctccagtttacgt
tacgaactcctggaagacaagtctcaggctacagaggagctgtccttgcttatccagaaa
ctgagtgacaaactgaacctaggccctactacacgcttgccctacaagtga
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