Oncorhynchus gorbuscha (pink salmon): 124011435
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Entry
124011435 CDS
T07892
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124011435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011435
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124011435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
124011435
NCBI-ProteinID:
XP_046180758
LinkDB
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Position
LG23:55862025..55957088
Genome browser
AA seq
1470 aa
AA seq
DB search
MRHHDGRYHYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPHV
EHYLRSIHSSPTLSMISAARGLSPADLAHEHMKERGLFGFPPPPPGASPAEYYHLMTSHR
NPYGELLMQGGAAAAAHLPDYITPMEASRFPSPRLTPRLNRKRALSISPLSDASIDLQTM
IRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSV
FGHTPPLIQPPPIFSSRQSALGLSSLPPASHNHNNGSQSKNTCGDSAVSSTVNPMITKRS
KVKTEVEYPRPLSPCSPDHLGGMLGLKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQE
QLVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCK
AYSRLENLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCT
KRYTDPSSLRKHVKTVHGPEAHVTKKQRSDLPPSRPVPPKENGENETGRGTEEKMDSTSR
GMEDYLQVKSIKTEKSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSGGGSMGDL
TGLDDPSGPLMDSSFSGLSSGTAGVGVGLHLRQHLGLSHIHGLEHLKKEKLKTARDSCQW
ANHHPAPPVQNTKLPPIPASGSLLESGNMCGGPGSFSLSELCSSKVTILNQLDHLMERRD
STTSTISSAYISRRSSGISPCYSSRRSSDASAFSGHRHHNISSTGSYDPISADLSRRSSD
ASQCGGGGGGGRLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCLALYRD
ASQGDSSSCYSSFDPVVPSGVPRRCSGDMGNCNGRSMMPHEAPSNIPRRASDPVPRRPSL
DPLSPLSHQPQVQHYNSTGNMQNLHPHASLPNQALSAAERRHLALQSHQPRSDDSLQRYP
YCPRPPSISENVAMVTMAGDMSGRRNSSEEEMMVLPDDVVHYITAQGGAGESDCANGYNR
QAQCGFHGDTINPNPQQQQQFYHQGRMAVVDTNMSMNPSSAPQTKRLSCALSPGHPKQSF
PSSLSKTSTMPVQWNEVSSGTVEALHNPTQHLPFGRSNSNLAMVQQKQNVVSFQKQNLNS
NQHIAQINHNLAHAAQQGRYIQQQKTDSRLGCVQQQSLQQQQPANANLNERVRLEYGFNQ
GLGPIDANANANQRSSCSSMAVGGTVHSVDTQNSRLRTQPGGSQSSQVTFKDSGVNSSRM
ISHQQKYNIASQVQHPIQNGGQILIQPRPPTEHKSLSRQHSGSMTIQRQNSIGNHCSNGN
NTDNNVMSYTGQIHVFEPNGNVNMQMMTSPVVDVLQCPSDSTETSMTSPGVNNQVSSTVD
SSNGTGAEDPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSLPL
PAGGSNMAIGDMSSLLTALAEENKFLSMMS
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaccacgatggaagatatcactatgaaccccacaccctccatgccatgcatggt
cctggactaggtggcagcccggtcatgtcagacatctctctgatccgtctgtccccccac
gcagccgggacaggggagtcccccttcagccccgctcacccctacttcaaccctcacgtg
gagcactacctccgctccattcacagcagcccaaccctgtccatgatctctgcggcccgc
ggactcagccctgcagacttggcacatgaacacatgaaagagcggggtctgtttgggttt
ccccctccccctcctggagccagccctgctgagtactaccacctgatgaccagccatcgt
aacccctacggagagctgctgatgcaggggggtgcggcggcagctgcacacctgccagac
tacatcacccctatggaagcgtcacggttccccagtcccagactgacccccaggctgaac
agaaagcgagccctgtccatctcgcctctctcagacgccagcatcgacctgcagaccatg
atccgtacctcgcccaactctctggtggcctacatcaacaactcacgctccagctctgca
gctagcagctcctacggacacctctctgttggaggcatcagtccgtcctttaccttcccc
catcacatcaaccccatggcctaccagcagctcctgtcccagcagagaggcctgagtgtg
ttcggccacacccctcctctcatccagcccccacccatcttctccagtcgccagtctgcc
ctgggtctctcctctctgccccccgcctcacacaaccacaacaatggctcacagtcaaag
aacacatgtggggactcggcagtgagcagtacagtcaatcccatgatcaccaagaggtca
aaggtgaagacagaggtggagtatccgaggccgctgtccccatgctctccggatcatcta
ggtgggatgctgggcctgaaggaggacttggataaagatgaatgcaagcatgagccagag
atggtgtatgagaccaactgccactgggaaggatgctccaaggagtacgacacgcaggaa
caactggtccatcacatcaacaacgaccacatccacggggagaagaaggagtttgtgtgc
cgctgggatgagtgttccagggagcagaagccttttaaggcccagtacatgctggtggtt
cacatgaggagacacacgggggagaagccacacaagtgtacctttgagggctgctgtaag
gcctattctcgcctggagaatctgaagacccacctgcgatctcacaccggggaaaaacca
tatgtgtgtgaccacgagggatgcaacaaagccttctccaacgcctcggacagagccaag
caccagaatcgcacacactccaacgagaaaccctacgtgtgtaaagtccccggctgtacg
aagcgctacacggaccccagctctctcaggaagcacgtgaagacagtccacggaccagag
gcccacgtcaccaagaaacagcgcagcgacctgccgcccagcagacccgttccacccaaa
gagaatggagagaacgagacaggccggggcacggaggagaagatggacagcacctcgaga
ggcatggaggactacctgcaggtcaagtctatcaagacggagaagtctgtgatgtatcag
tccagccctggtggtcagtcgtcatgtagcagcgagccgtcgccacttggcagttccacc
aaccatgacagtggagtagagatggccctccacagcggcgggggcagcatgggggacctg
actggactggacgacccctcggggcccctcatggactcctccttctctggcctctcgtct
gggacagcaggggtcggggtgggcctccacctacgtcaacacctaggcctcagccacatc
cacggactagaacacctgaagaaggagaaactgaagacggcgagggactcctgccagtgg
gccaatcatcatccagctcctccagtccagaacaccaagctaccgcccataccagcaagc
gggtcccttttggagagtggaaatatgtgtggcgggcctggatcgttcagcctcagtgag
ctgtgttccagtaaggtgactatcctgaaccagctggaccatctgatggagcgcagggac
agcaccaccagcaccatctcctctgcctacatcagccgccgctcctctggcatctccccc
tgctactccagccgccgctccagcgacgcctccgcattcagtggccaccgccaccacaac
atcagctccaccggctcctacgaccccatctctgcagacctgtcccgccgctccagcgac
gccagccagtgtgggggtggtggaggagggggacggctgcccagtcacctcagcctcacc
cccgcccagcactaccacctcaaggcgaaatatgcggcggctacaggcggagccccaccc
acacctttacccaacatggagaggatgagcctcaagacctgcttggccctctacagggac
gcttcccagggagactcgtcgtcttgttactcctccttcgaccccgttgtccccagtggg
gttcccaggcgctgcagcggcgatatgggaaactgtaacggccgcagcatgatgccccac
gaagctccgtccaacattccccgtcgggctagcgaccccgtcccccggcggccgtccctg
gacccgctgtccccgctgtcccatcagcctcaggtgcagcactacaacagcacgggcaac
atgcagaacctccacccacacgcctccctgccgaaccaggccctgtctgcagccgagcgg
cgccacctggcgctccagagccaccagccgcgctccgacgacagcctgcagcgatacccc
tactgcccccggccgcccagcatctctgagaacgtggccatggtgaccatggccggcgac
atgagcggtagacgcaacagcagtgaggaggagatgatggtacttccggatgacgtcgtt
cactacatcaccgctcagggcggagctggtgagtcagactgtgccaacgggtacaaccga
caagcacaatgtggtttccatggagacacaataaaccctaaccctcagcaacaacagcag
ttttaccaccagggaaggatggctgtggtggacaccaatatgagtatgaacccttcgtct
gcaccacaaaccaagcgcctctcctgtgccctaagcccaggccatccgaagcagtctttc
ccctcctcactcagtaagacgagcaccatgccggtacagtggaatgaggtcagctcaggg
actgtggaagctcttcacaacccaacccaacatctgccgtttggtcgaagcaactcaaac
ctcgccatggtccaacagaaacagaacgttgtctcgttccagaagcagaatcttaattcc
aaccaacacattgcacagattaaccacaacctggctcatgcagcccagcaggggagatac
atacagcagcagaagacagactccaggctgggctgtgtccagcaacagagcctacagcaa
cagcagcccgctaacgctaacctcaatgaacgagtgagactcgagtatgggtttaaccag
ggtctcggtcctattgatgctaacgctaacgctaaccagcggtcctcctgtagtagtatg
gcagttggtggcacagtgcacagtgtagacacgcagaacagccgactgaggacgcagcca
ggggggagtcaatcgtctcaagtcacatttaaggatagcggtgtgaattcttcgcggatg
atctcacatcaacagaaatataatatagcgtcccaggttcagcatcctatacagaatgga
ggccaaatactcatccagccaagaccgcccacagaacataagtctctaagcagacagcat
tcagggtcaatgacaatccagcgacaaaactcaattggcaatcactgcagcaatggcaac
aacacagacaacaatgttatgtcctacacaggacagatacacgtgtttgagccaaacggg
aacgtcaacatgcagatgatgacatcaccagtagtggatgttcttcaatgtccctcagac
agcactgagacctccatgacctcaccgggagtaaacaaccaggtctccagtacggtggac
tcgtccaatgggacaggggcagaggatccccagattgactttgacaccatgctggatgac
ggggaccactccagcctgatgtcaggcaccatcagccccagtatcctccagagtctgtcc
cagacctcctccagactcaccaccccccggaactctgtcaccctgccctccctgcccctc
cctgcagggggcagcaacatggccatcggcgatatgagctccctgctcaccgcgcttgca
gaagagaacaagttcctcagcatgatgtcataa
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