KEGG   Oncorhynchus gorbuscha (pink salmon): 124012113
Entry
124012113         CDS       T07892                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like isoform X1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00052  Galactose metabolism
ogo00510  N-Glycan biosynthesis
ogo00513  Various types of N-glycan biosynthesis
ogo00514  Other types of O-glycan biosynthesis
ogo00515  Mannose type O-glycan biosynthesis
ogo00533  Glycosaminoglycan biosynthesis - keratan sulfate
ogo00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ogo01100  Metabolic pathways
Module
ogo_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ogo_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    124012113
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    124012113
   00513 Various types of N-glycan biosynthesis
    124012113
   00515 Mannose type O-glycan biosynthesis
    124012113
   00514 Other types of O-glycan biosynthesis
    124012113
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    124012113
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    124012113
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ogo01003]
    124012113
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124012113
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124012113
Enzymes [BR:ogo01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     124012113
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     124012113
    2.4.1.90  N-acetyllactosamine synthase
     124012113
Glycosyltransferases [BR:ogo01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   124012113
Membrane trafficking [BR:ogo04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    124012113
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   124012113
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2 Mucin Dicty_REP
Other DBs
NCBI-GeneID: 124012113
NCBI-ProteinID: XP_046181506
LinkDB
Position
LG24:complement(12070478..12079285)
AA seq 385 aa
MLDSSLNSRLRRKGCTLVVVLGVINLLVALFYFMGYSNGFSPNQHIQTQTRIETDFITVT
LPPEDIGHHDLNNSFVTLQTPKLHDIHLPNTTTTTTNNTTTTTTTTTTTTSWKKLEKCPD
PSPHLVGPLRVEFSTPVSLDTVRKENPGLQEGGRYKPHDCVALQKVALIIPFRLRDEHLK
FWLYYLHPILQRQQLDYGVYVINQDGDNTFNRAKLMNIGYAEALKEYDYDCFVFSDVDLI
PMDDRNTYKCFRQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQFLEINGFPNNYWGWGG
EDDDIFNRVSSRGMSISRPDSEVGKCRMIRHERDKQNDPNPQRFDRIQRTRLTMNTDGIN
SLKYEVVKVEKDPLFTKITVDVGKP
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgctcgactcatctctcaactctaggctgcggaggaaaggctgcaccttggttgtagtt
ttaggtgttattaatctcttagtggctttattttatttcatgggttactcgaatgggttc
tcaccaaaccaacatatacagacacaaacgcgaattgaaactgattttattaccgtgaca
cttccaccggaagatattggacatcacgaccttaataacagctttgtaacattgcaaact
ccgaagcttcacgatatacatttacccaatacaactactacaacaactaataacactact
actactactactactactactactacaacttcgtggaaaaagttagaaaaatgtcctgat
ccgtctccacatcttgttgggcctctcagggttgagttctctacgcctgtcagcttggat
acagtgaggaaggagaacccaggcctgcaggaaggaggtcgctacaaaccacatgactgt
gtcgccctccaaaaggttgctctcatcatccccttccgccttcgtgacgagcacctcaag
ttctggctctactacctccatcccatccttcagcgccaacagctggactatggcgtctac
gtcatcaatcaggatggagacaacacgttcaacagggccaagctgatgaacattggctat
gctgaggccctgaaggagtatgactacgactgctttgtgttcagtgacgtggacctcatc
cccatggatgaccgcaacacctacaaatgcttccgccagcccagacacctgtccgtctcc
atggacaagtttggcttcaagttgccctataaccagtactttggcggtgtctcagcgtta
agtaaggagcagttcctggaaatcaacggctttcccaacaactactggggctggggtggt
gaagatgatgacattttcaacagggtgagctctagaggaatgtccatctctcgtccagat
agcgaggttggaaaatgccggatgatccgtcacgaaagagacaaacagaacgacccaaat
cctcagaggtttgacagaatacaacgcacaagactgacaatgaataccgatggtataaac
tctctcaagtacgaagtcgtcaaagtggaaaaggatcctctgttcacgaaaatcacagta
gatgtggggaaaccttag

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