KEGG   Oncorhynchus gorbuscha (pink salmon): 124013080
Entry
124013080         CDS       T07892                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010  MAPK signaling pathway
ogo04060  Cytokine-cytokine receptor interaction
ogo04150  mTOR signaling pathway
ogo04210  Apoptosis
ogo04217  Necroptosis
ogo04350  TGF-beta signaling pathway
ogo04620  Toll-like receptor signaling pathway
ogo04621  NOD-like receptor signaling pathway
ogo04622  RIG-I-like receptor signaling pathway
ogo04625  C-type lectin receptor signaling pathway
ogo04920  Adipocytokine signaling pathway
ogo05132  Salmonella infection
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124013080 (tnfa)
   04350 TGF-beta signaling pathway
    124013080 (tnfa)
   04150 mTOR signaling pathway
    124013080 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124013080 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124013080 (tnfa)
   04217 Necroptosis
    124013080 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124013080 (tnfa)
   04621 NOD-like receptor signaling pathway
    124013080 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    124013080 (tnfa)
   04625 C-type lectin receptor signaling pathway
    124013080 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    124013080 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124013080 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124013080 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ogo04052]
    124013080 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:ogo00536]
    124013080 (tnfa)
Cytokines and neuropeptides [BR:ogo04052]
 Cytokines
  Tumor necrosis fators
   124013080 (tnfa)
Glycosaminoglycan binding proteins [BR:ogo00536]
 Heparan sulfate / Heparin
  Cytokines
   124013080 (tnfa)
SSDB
Motif
Pfam: TNF Ig_NUP210_13th
Other DBs
NCBI-GeneID: 124013080
NCBI-ProteinID: XP_046183187
LinkDB
Position
LG24:complement(58605220..58608410)
AA seq 244 aa
MAGDCSRVMLDVESGPVYPATTVTLVRGKSTHRWRLCGALLAVALCVSAALFVTWHAKRQ
DQVEEVNELQHTLRQLSVNRKAAIHLEGEYTGSVKYRTTVEWTDDEGQAISQGGLKLNNN
EIVIPRPGLYFVYSQVSFHVSCKADPKHPNNQEMVHLSNTVTRWSPSYGTEENKEYQMLL
NSVRTVCKKSSNSEASEGQWYNAVYMGAVFSLEKGDRLRTVTENRLLPHLESGAGKNFFG
VFAL
NT seq 735 nt   +upstreamnt  +downstreamnt
atggcaggtgattgcagcagagtgatgttagacgtggagagtggccctgtgtacccagca
acgaccgtgaccctggtacgggggaagtccacacaccggtggaggctgtgtggtgccctg
ctggccgtggcactgtgtgtctcagctgcacttttcgttacctggcacgccaagagacaa
gatcaggtcgaggaagttaatgaacttcagcatacactgagacaactctctgtaaacaga
aaggctgccattcatctggaaggtgagtacaccggcagtgtaaaatacaggaccacagtg
gagtggacagacgatgagggccaggcaatctcacaggggggtcttaaactcaacaacaac
gagatcgtgatcccccggccgggcctatacttcgtctacagccaggtctctttccacgtc
agctgcaaggccgaccccaagcaccctaacaaccaggagatggttcacctgagtaacacg
gtcacgcgctggtccccaagctacggcaccgaagaaaacaaggagtaccagatgctgctc
aactccgtacgcaccgtgtgtaagaagtcttccaacagcgaggccagcgaaggacagtgg
tataatgccgtgtacatgggagccgtgttcagcctggagaagggagacaggctgcggaca
gtcacagagaacaggcttctgccccatctggagagcggtgctgggaagaacttctttggc
gtgttcgccttgtga

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