KEGG   Oncorhynchus gorbuscha (pink salmon): 124013307
Entry
124013307         CDS       T07892                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-like isoform X1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008  Ribosome biogenesis in eukaryotes
ogo03013  Nucleocytoplasmic transport
ogo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124013307
   03008 Ribosome biogenesis in eukaryotes
    124013307
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124013307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124013307
   03009 Ribosome biogenesis [BR:ogo03009]
    124013307
   03016 Transfer RNA biogenesis [BR:ogo03016]
    124013307
   03036 Chromosome and associated proteins [BR:ogo03036]
    124013307
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124013307
   04031 GTP-binding proteins [BR:ogo04031]
    124013307
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     124013307
Ribosome biogenesis [BR:ogo03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    124013307
  Pre-60S particles
    124013307
Transfer RNA biogenesis [BR:ogo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    124013307
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     124013307
   Spindle formation proteins
    124013307
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124013307
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    124013307
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RNA_helicase Gtr1_RagA ArgoMid AAA_24 TsaE AAA_33 AAA_22 AAA_16 AAA_7
Other DBs
NCBI-GeneID: 124013307
NCBI-ProteinID: XP_046183527
LinkDB
Position
LG24:complement(12426571..12438027)
AA seq 227 aa
MCNLRNGRPTKMTARAQRRMLNELVLCGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHP
LVFHTTRGTIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV
RVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLV
GDPNLEFVEMPALAPPEVVMDASLAAQYENDLKVAAETGLPDEDDDL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtgcaatttaaggaatggacgtcctacaaagatgactgcaagagcacagcgcagaatg
cttaatgagctagtgttgtgcggagatggaggcacaggaaaaaccaccttcgtgaagagg
catttaacgggagagtttgaaaagaaatacgttgcgactctgggagtagaggtgcacccc
ttggtcttccacaccactcgagggaccatcaagtacaatgtctgggacacagccggccag
gagaagtttggggggctcagagatggctactacatacaggcccagtgtgcgatcatcatg
ttcgacgtcacatctcgcgtcacctataagaacgtgcccaactggcaccgcgacctggtg
cgcgtctgcgagaacatacccatagtcctgtgcggcaacaaggtggacatcaaggacaga
aaggtcaaagccaagagcatcgtgttccaccgtaagaagaaccttcagtactatgacatc
tcagccaagagtaactacaactttgagaagcccttcctgtggctggccaggaagctggta
ggagaccccaacctagagtttgtggagatgccagccctcgcccccccagaagtcgtcatg
gacgcctccctggctgcgcagtacgagaacgaccttaaggttgccgcagaaacagggctt
ccagatgaagacgacgacctttaa

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