Oncorhynchus gorbuscha (pink salmon): 124013609
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Entry
124013609 CDS
T07892
Symbol
nectin4a
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ogo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
124013609 (nectin4a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124013609 (nectin4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124013609 (nectin4a)
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Nectin family
124013609 (nectin4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
TMEM154
LST1
LapA_dom
Protocadherin
EphA2_TM
DUF515
DUF7237
FAM176
Motif
Other DBs
NCBI-GeneID:
124013609
NCBI-ProteinID:
XP_046183884
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Position
LG25:30590113..30618103
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AA seq
610 aa
AA seq
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MTSLLCGLTPLLWILGSFIAVVQGDFEQQSPVQSLTEVETRLPCRFKVEVGQVVVQVTWT
KERADGTKDQIITVHHTAGQTEFGQYSGRVRFGSSEPTVDSSLIIMNTVESDEGTYNCHI
STFPSGNFEQQLSLTVWTTPISSLDPVILVEGQSFRLAASCRSVARPPPILNWDTDLTGL
SQNRSSVGGSVSTHFSLHPLRSMNGMRLDCLVRHRALKEPRRITNNLVVHYPPNAEISGF
NHNWYAGLEGAALSCVSGGNPKPQSFTWTRKGGDLPEGVTAGNGSLLFNRPLGLTDAGIY
QCVAYNVVGTGKAEVEITVTEFPQKPVFFNSLLMIIVGGVAGGLLLIMVIIVISVTRYHK
RKNKKLERELNVKKEEISTLSRQASFRRVNSVSTDARGQMEENIPLRVEGTLRTSLSSLG
DPGRIRDSRSTLVGGGGLDYLGRPVLNNSSRRGRENRAMDREEENRLRVESYVRNSTMSL
GTRLHLPIQPSPFPMEQSTKLLRSLNGSVIIPTEGGLHARNSPLSCSYPPVTDDEQEEGE
SVEGERGTSSRMSRLDQGRSEDQDNSSQISDAERGHNHHFQQNNGTLRPKTRPNGIPSPH
ASLIHKAQIV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactcctgtgcggactgacaccgctgctgtggatccttggaagtttcattgcc
gtggtgcagggggactttgagcaacaatctcccgtgcagtccttgaccgaggttgagacc
cggctgccctgccggttcaaggtggaagtgggccaggtggtggttcaggtcacctggacc
aaggagagagcagatggtaccaaggatcagatcattacagtacaccacactgccggacaa
acagagtttggtcagtactcggggcgtgtgcggttcggcagcagtgagcccacagtggac
tcgtctctgatcatcatgaacactgtggagtcagatgagggcacgtacaactgtcacatc
agcaccttcccctcggggaactttgaacaacagctgtcactcaccgtgtggaccacgccc
atctcctccctggaccctgtaattcttgtcgagggccagtcctttcgattggctgcctcc
tgccgctccgtggcccgccccccacccatcctcaactgggacacagacctgacgggcctg
tcacagaataggagttcggtgggcgggtcagtctccacccacttctccctgcaccccctg
aggagtatgaacgggatgaggctggactgtctggtgaggcaccgtgctctgaaggaaccc
cgcaggatcaccaacaacctggtggtgcactatcctcctaatgcagagatctctgggttt
aatcataactggtatgctggtctggagggagctgccctcagctgtgtcagtggaggaaac
cccaaaccacagagtttcacctggaccaggaagggtggagacttaccagagggcgttacg
gcagggaatggatccctgctgttcaataggcccctcggtttgacagacgctggtatctac
caatgtgtggcctataacgttgtggggaccgggaaagcagaggtggagatcactgtgacg
gagtttcctcagaagccggtgtttttcaacagtctcctgatgatcatagttggcggggtg
gctggaggactgctactcatcatggtcatcatagtaatctcagtgacccgttaccacaaa
cgcaaaaacaagaaactggagagagaattgaatgtgaagaaggaggagatcagtacactc
tccaggcaggcctctttcaggagagtcaactcagtcagtacggatgctagaggacagatg
gaggagaatatccctctcagagtggagggtacactgcggaccagtctgtcctctctaggg
gatccagggcgcatcagggacagtcgctctactctggtagggggaggtggactagactac
ctaggtcgacctgttctgaacaactcttcacgacgagggagggagaacagagccatggac
agagaggaggagaacagacttagggtggagtcatacgtacggaatagcactatgtctttg
ggaacccgtctccacctgccaatccaaccctctcccttcccaatggaacagtccaccaag
ctgctgaggtccctgaacggcagcgtcatcatcccaacagaggggggtttacatgcacgg
aactcccctctcagctgcagctaccctcctgtcacagacgacgaacaggaggagggtgaa
agtgtggagggggagcgggggacaagctccaggatgagtcgtttagatcaggggaggtca
gaggaccaggacaacagttctcagatctcagacgcggaacgtggacacaaccatcacttc
cagcagaacaacggaacgctgagacccaaaacccggcccaacggcatcccatccccacac
gcctccctcatccataaggcccagattgtatag
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